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Homoplasy or plesiomorphy? Reconstruction of the evolutionary history of mitochondrial gene order rearrangements in the subphylum Neodermata 期刊论文
INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2019, 卷号: 49, 期号: 10, 页码: 819-829
Authors:  Zhang, Dong;  Li, Wen X.;  Zou, Hong;  Wu, Shan G.;  Li, Ming;  Jakovlic, Ivan;  Zhang, Jin;  Chen, Rong;  Wang, Guitang
View  |  Adobe PDF(688Kb)  |  Favorite  |  View/Download:12/6  |  Submit date:2019/11/08
Gene rearrangement pathway  Mitochondrial phylogenomics  Plesiomorphic gene order state  Phylogenetic marker  
Mitochondrial Genomes of Two Thaparocleidus Species (Platyhelminthes: Monogenea) Reveal the First rRNA Gene Rearrangement among the Neodermata 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2019, 卷号: 20, 期号: 17, 页码: 14
Authors:  Zhang, Dong;  Zou, Hong;  Jakovlic, Ivan;  Wu, Shan G.;  Li, Ming;  Zhang, Jin;  Chen, Rong;  Li, Wen X.;  Wang, Gui T.
View  |  Adobe PDF(3213Kb)  |  Favorite  |  View/Download:7/2  |  Submit date:2019/11/29
dactylogyridae  ancyrocephalinae  phylogenetics  paraphyly  ancylodiscoididae  large non-coding region  
Mitochondrial Architecture Rearrangements Produce Asymmetrical Nonadaptive Mutational Pressures That Subvert the Phylogenetic Reconstruction in Isopoda 期刊论文
GENOME BIOLOGY AND EVOLUTION, 2019, 卷号: 11, 期号: 7, 页码: 1797-1812
Authors:  Zhang, Dong;  Zou, Hong;  Hua, Cong-Jie;  Li, Wen-Xiang;  Mahboob, Shahid;  Al-Ghanim, Khalid Abdullah;  Al-Misned, Fahad;  Jakovlic, Ivan;  Wang, Gui-Tang
View  |  Adobe PDF(615Kb)  |  Favorite  |  View/Download:39/17  |  Submit date:2019/10/21
base composition skew  GC skew  mitochondrial phylogenomics  Cymothoida  replication origin inversion  compositional heterogeneity  
Gut segments outweigh the diet in shaping the intestinal microbiota composition in grass carp Ctenopharyngodon idellus 期刊论文
AMB EXPRESS, 2019, 卷号: 9, 页码: 9
Authors:  Feng, Wenwen;  Zhang, Jing;  Jakovlic, Ivan;  Xiong, Fan;  Wu, Shangong;  Zou, Hong;  Li, Wenxiang;  Li, Ming;  Wang, Guitang
Favorite  |  View/Download:7/0  |  Submit date:2019/06/10
Gut microbiota  Diet  Midgut  Hindgut  Grass carp  
Basal position of two new complete mitochondrial genomes of parasitic Cymothoida (Crustacea: Isopoda) challenges the monophyly of the suborder and phylogeny of the entire order 期刊论文
PARASITES & VECTORS, 2018, 卷号: 11, 页码: 15
Authors:  Hua, Cong J.;  Li, Wen X.;  Zhang, Dong;  Zou, Hong;  Li, Ming;  Jakovlic, Ivan;  Wu, Shan G.;  Wang, Gui T.
Favorite  |  View/Download:18/0  |  Submit date:2019/07/01
Ichthyoxenos japonensis  Tachaea chinensis  Mitochondrial genome  RNA secondary structure  Gene rearrangement  Phylogenetic analysis  
Mitochondrial genomes of two diplectanids (Platyhelminthes: Monogenea) expose paraphyly of the order Dactylogyridea and extensive tRNA gene rearrangements 期刊论文
PARASITES & VECTORS, 2018, 卷号: 11, 页码: 13
Authors:  Zhang, Dong;  Li, Wen X.;  Zou, Hong;  Wu, Shan G.;  Li, Ming;  Jakovlic, Ivan;  Zhang, Jin;  Chen, Rong;  Wang, Gui T.
Favorite  |  View/Download:10/0  |  Submit date:2019/07/02
Phylogenomics  Gene rearrangement  Molecular markers  Gene loss  Pseudo tRNA gene tandem array  
Dietary Bile Salt Types Influence the Composition of Biliary Bile Acids and Gut Microbiota in Grass Carp 期刊论文
FRONTIERS IN MICROBIOLOGY, 2018, 卷号: 9, 期号: 1, 页码: 13
Authors:  Xiong, Fan;  Wu, Shan-Gong;  Zhang, Jing;  Jakovlic, Ivan;  Li, Wen-Xiang;  Zou, Hong;  Li, Ming;  Wang, Gui-Tang
View  |  Adobe PDF(2478Kb)  |  Favorite  |  View/Download:13/3  |  Submit date:2019/07/02
bile acid  gut microbiota  lipid metabolism  freshwater fish  in vivo  
The complete mitochondrial genome of Cymothoa indica has a highly rearranged gene order and clusters at the very base of the Isopoda clade 期刊论文
PLOS ONE, 2018, 卷号: 13, 期号: 9, 页码: 16
Authors:  Zou, Hong;  Jakovlic, Ivan;  Zhang, Dong;  Chen, Rong;  Mahboob, Shahid;  Al-Ghanim, Khalid Abdullah;  Al-Misned, Fahad;  Li, Wen-Xiang;  Wang, Gui-Tang
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Three new Diplozoidae mitogenomes expose unusual compositional biases within the Monogenea class: implications for phylogenetic studies 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2018, 卷号: 18, 期号: 1, 页码: 17
Authors:  Zhang, Dong;  Zou, Hong;  Wu, Shan G.;  Li, Ming;  Jakovlic, Ivan;  Zhang, Jin;  Chen, Rong;  Li, Wen X.;  Wang, Gui T.
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Phylogenomics  Mutational bias  Molecular marker  Long branch  Amino acid usage  Ancestral gene order reconstruction  
The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution with in the Chromadorea class 期刊论文
BMC GENOMICS, 2017, 卷号: 18, 期号: 1, 页码: 17
Authors:  Zou, Hong;  Jakovlic, Ivan;  Chen, Rong;  Zhang, Dong;  Zhang, Jin;  Li, Wen-Xiang;  Wang, Gui-Tang
View  |  Adobe PDF(1643Kb)  |  Favorite  |  View/Download:14/2  |  Submit date:2019/07/03
Gene order rearrangement  Gene duplication  tRNA duplication  Incomplete tRNA set  tRNA remolding  TDRL  Pseudogenes  Mitochondrial phylogenomics  Spirurida  Camallanina