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Bichir microRNA repertoire suggests a ray-finned fish affinity of Polypteriforme 期刊论文
GENE, 2015, 卷号: 566, 期号: 2, 页码: 242-247
Authors:  Yang, Liandong;  Zhang, Zhaolei;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Fish Phylogeny & Biogeog Grp, Wuhan 430072, Hubei, Peoples R China.
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Phylogeny  Polypteriformes  Micrornas  Bichir  
Transcriptome analysis of the plateau fish (Triplophysa dalaica): Implications for adaptation to hypoxia in fishes 期刊论文
GENE, 2015, 卷号: 565, 期号: 2, 页码: 211-220
Authors:  Wang, Ying;  Yang, Liandong;  Wu, Bo;  Song, Zhaobin;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Triplophysa Dalaica  Transcriptome  Hypoxic Adaptation  Positive Selection  Branch-site Model  
Genome-wide identification and characterization of teleost-specific microRNAs within zebrafish 期刊论文
GENE, 2015, 卷号: 561, 期号: 2, 页码: 181-189
Authors:  Yang, Liandong;  Irwin, David M.;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China.
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Teleost  Microrna  Comparative Genomics  Zebrafish Embryogenesis  
The complete mitochondrial genome of Clarias fuscus (Teleostei, Siluriformes: Clariidae) 期刊论文
MITOCHONDRIAL DNA, 2015, 卷号: 26, 期号: 2, 页码: 270-271
Authors:  Zhou, Chuanjiang;  Wang, Xuzhen;  Guan, Lihong;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Clarias Fuscus  Clariidae  Complete Mitochondrial Genome  
Genetic structure and historical demography of Schizothorax nukiangensis (Cyprinidae) in continuous habitat 期刊论文
ECOLOGY AND EVOLUTION, 2015, 卷号: 5, 期号: 4, 页码: 984-995
Authors:  Chen, Weitao;  Du, Kang;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China.
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Expansion Event  Genetic Structure  Isolated By Distance  Nujiang River  Population Bottleneck  Schizothorax Nukiangensis  
The complete mitochondrial genome of Leiocassis crassilabris (Teleostei, Siluriformes: Bagridae) 期刊论文
MITOCHONDRIAL DNA, 2014, 卷号: 25, 期号: 3, 页码: 183-184
Authors:  Zhou, Chuanjiang;  Wang, Xuzhen;  Wang, Dengqiang;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Bagridae  Complete Mitochondrial Genome  Leiocassis Crassilabris  
A bioinformatics-based update on microRNAs and their targets in rainbow trout (Oncorhynchus mykiss) 期刊论文
GENE, 2014, 卷号: 533, 期号: 1, 页码: 261-269
Authors:  Yang, Liandong;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China.
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Rainbow Trout  Comparative Genomics  Micrornas  Targets  
Genome-wide identification, characterization, and expression analysis of lineage-specific genes within zebrafish 期刊论文
BMC GENOMICS, 2013, 卷号: 14
Authors:  Yang, Liandong;  Zou, Ming;  Fu, Beide;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China.
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Teleost  Lineage-specific Gene  Transcriptome  Zebrafish Embryogenesis  
The complete mitochondrial genome of Glyptothorax fukiensis fukiensis (Teleostei, Siluriformes: Sisoridae) 期刊论文
MITOCHONDRIAL DNA, 2012, 卷号: 23, 期号: 6, 页码: 414-416
Authors:  Zhou, Chuanjiang;  Wang, Dengqiang;  Yu, Meiling;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Complete Mitochondrial Genome  Glyptothorax Fukiensis Fukiensis  Sisoridae  
Integrating multi-origin expression data improves the resolution of deep phylogeny of ray-finned fish (Actinopterygii) 期刊论文
SCIENTIFIC REPORTS, 2012, 卷号: 2, 期号: -
Authors:  Zou, Ming;  Guo, Baocheng;  Tao, Wenjing;  Arratia, Gloria;  He, Shunping;  He, SP (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Higher Teleostean Phylogenies  Mitochondrial-dna Sequences  Mitogenomic Perspective  Molecular Phylogenies  Missing Data  Time-scale  Tree  Interrelationships  Inference  Selection