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DNA barcoding the ichthyofauna of the Yangtze River: Insights from the molecular inventory of a mega-diverse temperate fauna 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2019, 卷号: 19, 期号: 5, 页码: 1278-1291
Authors:  Shen, Yanjun;  Hubert, Nicolas;  Huang, Yan;  Wang, Xuzheng;  Gan, Xiaoni;  Peng, Zuogang;  He, Shunping
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conservation  cryptic diversity  phylogeography  species delimitation  species polyphyly  
Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation 期刊论文
NATURE ECOLOGY & EVOLUTION, 2019, 卷号: 3, 期号: 5, 页码: 823-833
Authors:  Wang, Kun;  Shen, Yanjun;  Yang, Yongzhi;  Gan, Xiaoni;  Liu, Guichun;  Hu, Kuang;  Li, Yongxin;  Gao, Zhaoming;  Zhu, Li;  Yan, Guoyong;  He, Lisheng;  Shan, Xiujuan;  Yang, Liandong;  Lu, Suxiang;  Zeng, Honghui;  Pan, Xiangyu;  Liu, Chang;  Yuan, Yuan;  Feng, Chenguang;  Xu, Wenjie;  Zhu, Chenglong;  Xiao, Wuhan;  Done, Yang;  Wang, Wen;  Qiu, Qiang;  He, Shunping
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The potential colonization histories of Opsariichthys bidens (Cyprinidae) in China using Bayesian binary MCMC analysis 期刊论文
GENE, 2018, 卷号: 676, 期号: 1, 页码: 1-8
Authors:  Chen, Weitao;  Schmidt, Bjorn, V;  He, Shunping
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Colonization histories  Opsariichthys bidens  Bayesian binary MCMC analysis  Vicariance  Dispersal  
Ancient duplications and functional divergence in the interferon regulatory factors of vertebrates provide insights into the evolution of vertebrate immune systems 期刊论文
DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY, 2018, 卷号: 81, 期号: 1, 页码: 324-333
Authors:  Du, Kang;  Zhong, Zaixuan;  Fang, Chengchi;  Dai, Wei;  Shen, Yanjun;  Gan, Xiaoni;  He, Shunping
Adobe PDF(1631Kb)  |  Favorite  |  View/Download:22/4  |  Submit date:2019/07/03
Interferon regulatory factor (IRF)  Interferon (IFN)  Adaptive immune system (AIS)  Vertebrate immunity  Whole-genome duplication (WGD)  
Phylogeographic structure, cryptic speciation and demographic history of the sharpbelly (Hemiculter leucisculus), a freshwater habitat generalist from southern China 期刊论文
BMC EVOLUTIONARY BIOLOGY, 2017, 卷号: 17, 期号: 1, 页码: 13
Authors:  Chen, Weitao;  Zhong, Zaixuan;  Dai, Wei;  Fan, Qi;  He, Shunping
Adobe PDF(1591Kb)  |  Favorite  |  View/Download:23/3  |  Submit date:2019/08/01
Phylogeographic structure  Cryptic speciation  Hemiculter leucisculus  Southern China  Multilocus  
Molecular phylogeny and divergence time estimates using the mitochondrial genome for the hadal snailfish from the Mariana trench 期刊论文
SCIENCE BULLETIN, 2017, 卷号: 62, 期号: 16, 页码: 1106-1108
Authors:  Shen, Yanjun;  Dai, Wei;  Gao, Zhaoming;  Yan, Guoyong;  Gan, Xiaoni;  He, Shunping
Adobe PDF(698Kb)  |  Favorite  |  View/Download:24/6  |  Submit date:2019/08/01
Genetic differentiation of the Schizothorax species complex (Cyprinidae) in the Nujiang River (upper Salween) 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7, 期号: 1, 页码: 11
Authors:  Chen, Weitao;  Yue, Xingjian;  He, Shunping
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Identification of Triplophysa species from the Qinghai-Tibetan Plateau (QTP) and its adjacent regions through DNA barcodes 期刊论文
GENE, 2017, 卷号: 605, 期号: 1, 页码: 12-19
Authors:  Li, Jiuxuan;  Wang, Ying;  Jin, Huifang;  Li, Wujiao;  Yan, Chaochao;  Yan, Pengfei;  Zhang, Xiuyue;  He, Shunping;  Song, Zhaobin
Adobe PDF(680Kb)  |  Favorite  |  View/Download:27/5  |  Submit date:2019/10/08
Triplophysa  DNA barcoding  Intraspecific and interspecific genetic distance  Phylogenetic tree  Species identification  
The first complete mitogenome of the South China deep-sea giant isopod Bathynomus sp (Crustacea: Isopoda: Cirolanidae) allows insights into the early mitogenomic evolution of isopods 期刊论文
ECOLOGY AND EVOLUTION, 2017, 卷号: 7, 期号: 6, 页码: 1869-1881
Authors:  Shen, Yanjun;  Kou, Qi;  Zhong, Zaixuan;  Li, Xinzheng;  He, Lisheng;  He, Shunping;  Gan, Xiaoni
Adobe PDF(1234Kb)  |  Favorite  |  View/Download:15/3  |  Submit date:2019/09/29
Bathynomus  deep sea  gene rearrangement  Isopoda  mitochondrial genome  
Divergent DNA Methylation Provides Insights into the Evolution of Duplicate Genes in Zebrafish 期刊论文
G3-GENES GENOMES GENETICS, 2016, 卷号: 6, 期号: 11, 页码: 3581-3591
Authors:  Zhong, Zaixuan;  Du, Kang;  Yu, Qian;  Zhang, Yong E.;  He, Shunping
Adobe PDF(1707Kb)  |  Favorite  |  View/Download:14/3  |  Submit date:2019/09/05
divergence  duplication  methylation  transcriptome  zebrafish