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Exploration of Genetic Variations through Single-cell Whole-genome Sequencing in the Model Ciliate Tetrahymena thermophila 期刊论文
JOURNAL OF EUKARYOTIC MICROBIOLOGY, 2019, 期号: 1, 页码: 12
Authors:  Chen, Kai;  Wang, Guangying;  Xiong, Jie;  Jiang, Chuanqi;  Miao, Wei
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Ciliated protozoa  population genetics  single-cell resequencing  variation detection  whole-genome amplification  
Hidden genomic evolution in a morphospecies-The landscape of rapidly evolving genes in Tetrahymena 期刊论文
PLOS BIOLOGY, 2019, 卷号: 17, 期号: 6, 页码: 38
Authors:  Xiong, Jie;  Yang, Wentao;  Chen, Kai;  Jiang, Chuanqi;  Ma, Yang;  Chai, Xiaocui;  Yan, Guanxiong;  Wang, Guangying;  Yuan, Dongxia;  Liu, Yifan;  Bidwell, Shelby L.;  Zafar, Nikhat;  Hadjithomas, Michalis;  Krishnakumar, Vivek;  Coyne, Robert S.;  Orias, Eduardo;  Miao, Wei
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Insights into the origin and evolution of Peritrichia (Oligohymenophorea, Ciliophora) based on analyses of morphology and phylogenomics 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2019, 卷号: 132, 期号: 1, 页码: 25-35
Authors:  Jiang, Chuan-Qi;  Wang, Guang-Ying;  Xiong, Jie;  Yang, Wen-Tao;  Sun, Zong-Yi;  Feng, Jin-Mei;  Warren, Alan;  Miao, Wei
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Parallel adaptive radiation  Peritrichia  Phylogenomics  Morphology  Spasmin  
Multigene-based phylogeny of Urostylida (Ciliophora, Hypotrichia), with establishment of a novel family 期刊论文
ZOOLOGICA SCRIPTA, 2018, 卷号: 47, 期号: 2, 页码: 243-254
Authors:  Lyu, Zhao;  Wang, Jingyi;  Huang, Jie;  Warren, Alan;  Shao, Chen
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multigene  new family  phylogeny  Urostylida  
Phylogenomic analysis of Balantidium ctenopharyngodoni (Ciliophora, Litostomatea) based on single-cell transcriptome sequencing 期刊论文
PARASITE, 2017, 卷号: 24, 期号: 1, 页码: 10
Authors:  Sun, Zongyi;  Jiang, Chuanqi;  Feng, Jinmei;  Yang, Wentao;  Li, Ming;  Miao, Wei
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Balantidium ctenopharyngodoni  Trichostomatia  single-cell transcriptome sequencing  SSU rDNA  phylogenomic analysis  
Systematic studies on ciliates (Alveolata, Ciliophora) in China: Progress and achievements based on molecular information 期刊论文
EUROPEAN JOURNAL OF PROTISTOLOGY, 2017, 卷号: 61, 期号: 1, 页码: 409-423
Authors:  Gao, Feng;  Huang, Jie;  Zhao, Yan;  Li, Lifang;  Liu, Weiwei;  Miao, Miao;  Zhang, Qianqian;  Li, Jiamei;  Yi, Zhenzhen;  El-Serehy, Hamed A.;  Warren, Alan;  Song, Weibo
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Ciliates  Molecular systematics  Phylogeny  Barcoding  
Spatio-temporal variability of periphytic protozoa related to environment in the Niyang River, Tibet, China 期刊论文
CHINESE JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2017, 卷号: 35, 期号: 3, 页码: 489-500
Authors:  Liu Haiping;  Ye Shaowen;  Yang Xuefeng;  Guo Chuanbo;  Zhang Huijuan;  Fan Liqing;  Zhang Liangsong;  Sovan Lek;  Li Zhongjie
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Tibetan Plateau  Niyang River  periphytic protozoa  environment  spatio-temporal dynamic  
Phylogenomics solves a long-standing evolutionary puzzle in the ciliate world: The subclass Peritrichia is monophyletic 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2017, 卷号: 106, 期号: 1, 页码: 1-5
Authors:  Gentekaki, Eleni;  Kolisko, Martin;  Gong, Yingchun;  Lynn, Denis
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Ciliophora  Peritrichia  Sessilida  Mobilida  Phylogenomics  
Genome of the facultative scuticociliatosis pathogen Pseudocohnilembus persalinus provides insight into its virulence through horizontal gene transfer 期刊论文
SCIENTIFIC REPORTS, 2015, 卷号: 5, 期号: 1, 页码: 1-12
Authors:  Xiong, Jie;  Wang, Guangying;  Cheng, Jun;  Tian, Miao;  Pan, Xuming;  Warren, Alan;  Jiang, Chuanqi;  Yuan, Dongxia;  Miao, Wei
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Phylogenomic analyses reveal subclass Scuticociliatia as the sister group of subclass Hymenostomatia within class Oligohymenophorea 期刊论文
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2015, 卷号: 90, 页码: 104-111
Authors:  Feng, Jin-Mei;  Jiang, Chuan-Qi;  Warren, Alan;  Tian, Miao;  Cheng, Jun;  Liu, Guang-Long;  Xiong, Jie;  Miao, Wei;  Miao, W (reprint author), Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Peoples R China.
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Oligohymenophorea  Scuticociliatia  Hymenostomatia  Phylogenomics Analysis