| Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda | |
| Sun Yanhong1,2; Li Pei1,2; Wang Guiying1,2; Sun Renli1,2; Chen Jian1,2; Zhou Qi3; Tong Jingou4; Li Qing1,2 | |
| Corresponding Author | Tong Jingou(jgtong@ihb.ac.cn) ; Li Qing(xfsckj@163.com) |
| 2020-12-01 | |
| Source Publication | JOURNAL OF OCEANOLOGY AND LIMNOLOGY
 |
| ISSN | 2096-5508 |
| Pages | 13 |
| Abstract | Ancherythroculter nigrocauda is a fish endemic to the upper areas of the Changjiang (Yangtze) River in China. Quantitative trait locus (QTL) mapping is a powerful tool to identify potential genes affecting traits of economic importance in domestic animals. In this study, a high-density genetic map was constructed with 5 901 single nucleotide polymorphism (SNP) makers by sequencing 92 individual fish from a F1 family using the specific-locus amplified fragment sequencing approach. Initially, 48 QTLs for total length, body length, body height, and body weight were identified according to the high density of the genetic map with 24 LGs, a total length of 3 839.4 cM, and marker spacing of about 0.82 cM. These QTLs explained 27.1%-49.9% of phenotypic variance. The results of this study suggest that major QTLs are responsible for the growth of A. nigrocauda, and these are potentially useful in comparative genomics research, genome assembly, and marker-assisted breeding programs for this species. |
| Keyword | Ancherythroculter nigrocauda specific-locus amplified fragment high-density genetic map quantitative trait locus |
| DOI | 10.1007/s00343-020-9290-7 |
| Funding Organization | Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| Funding Project | Technical Innovation Project of Hubei Province[2018ABA105] ; Enterprise Technology Innovation Project of Wuhan[39] |
| WOS Research Area | Marine & Freshwater Biology ; Oceanography |
| WOS Subject | Limnology ; Oceanography |
| WOS ID | WOS:000595367600002 |
| WOS Keyword | LINKAGE MAP ; LOCI ; IDENTIFICATION ; TRAIT ; DISTORTION ; 2B-RAD ; AFLP |
| Publisher | SCIENCE PRESS |
| Funding Organization | Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Technical Innovation Project of Hubei Province ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan ; Enterprise Technology Innovation Project of Wuhan |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ihb.ac.cn/handle/342005/39411 |
| Collection | 鱼类生物学及渔业生物技术研究中心_期刊论文 |
| Corresponding Author | Tong Jingou; Li Qing |
| Affiliation | 1.Wuhan Acad Agr Sci, Fisheries Res Inst, Wuhan 430207, Peoples R China 2.Wuhan Xianfeng Aquaculture Technol Co Ltd, Wuhan 430207, Peoples R China 3.Wuhan Acad Agr Sci, Wuhan 430207, Hubei, Peoples R China 4.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China |
| Recommended Citation GB/T 7714 | Sun Yanhong,Li Pei,Wang Guiying,et al. Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda[J]. JOURNAL OF OCEANOLOGY AND LIMNOLOGY,2020:13. |
| APA | Sun Yanhong.,Li Pei.,Wang Guiying.,Sun Renli.,Chen Jian.,...&Li Qing.(2020).Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda.JOURNAL OF OCEANOLOGY AND LIMNOLOGY,13. |
| MLA | Sun Yanhong,et al."Construction of the first high-density genetic map for growth related QTL analysis in Ancherythroculter nigrocauda".JOURNAL OF OCEANOLOGY AND LIMNOLOGY (2020):13. |
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