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题名: The complete mitochondrial genome of parasitic nematode Camallanus cotti: extreme discontinuity in the rate of mitogenomic architecture evolution with in the Chromadorea class
作者: Zou, Hong1, 2; Jakovlic, Ivan3; Chen, Rong3; Zhang, Dong1, 2, 4; Zhang, Jin3; Li, Wen-Xiang1, 2; Wang, Gui-Tang1, 2
关键词: Gene order rearrangement ; Gene duplication ; tRNA duplication ; Incomplete tRNA set ; tRNA remolding ; TDRL ; Pseudogenes ; Mitochondrial phylogenomics ; Spirurida ; Camallanina
刊名: BMC GENOMICS
发表日期: 2017-11-02
DOI: 10.1186/s12864-017-4237-x
卷: 18
收录类别: SCI
文章类型: Article
WOS标题词: Science & Technology ; Life Sciences & Biomedicine
类目[WOS]: Biotechnology & Applied Microbiology ; Genetics & Heredity
研究领域[WOS]: Biotechnology & Applied Microbiology ; Genetics & Heredity
英文摘要: Background: Complete mitochondrial genomes are much better suited for the taxonomic identification and phylogenetic studies of nematodes than morphology or traditionally-used molecular markers, but they remain unavailable for the entire Camallanidae family (Chromadorea). As the only published mitogenome in the Camallanina suborder (Dracunculoidea superfamily) exhibited a unique gene order, the other objective of this research was to study the evolution of mitochondrial architecture in the Spirurida order. Thus, we sequenced the complete mitogenome of the Camallanus cotti fish parasite and conducted structural and phylogenomic comparative analyses with all available Spirurida mitogenomes.
关键词[WOS]: GENE-ORDER ; PHYLOGENETIC-RELATIONSHIPS ; TANDEM DUPLICATION ; DNA RECOMBINATION ; CYST-NEMATODE ; RIBOSOMAL-RNA ; SEQUENCE ; REARRANGEMENT ; ORGANIZATION ; CHINA
语种: 英语
项目资助者: Earmarked Fund for China Agriculture Research System(CARS-45-15) ; National Natural Science Foundation of China(31572658) ; Major Scientific and Technological Innovation Project of Hubei Province(2015ABA045)
WOS记录号: WOS:000414332400002
ISSN号: 1471-2164
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内容类型: 期刊论文
URI标识: http://ir.ihb.ac.cn/handle/342005/38899
Appears in Collections:鱼类生物学及渔业生物技术研究中心_期刊论文

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作者单位: 1.Chinese Acad Sci, Minist Agr, Key Lab Aquaculture Dis Control, Wuhan 430072, Hubei, Peoples R China
2.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Hubei, Peoples R China
3.Wuhan Inst Biotechnol, Biotransduct Lab, Wuhan 430075, Hubei, Peoples R China
4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
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