| Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K) | |
| Fan, Guangyi1,9; Song, Yue1; Yang, Liandong2; Huang, Xiaoyun1; Zhang, Suyu1; Zhang, Mengqi1; Yang, Xianwei1; Chang, Yue1; Zhang, He1,9; Li, Yongxin3; Liu, Shanshan1; Yu, Lili1; Chu, Jeffery4; Seim, Inge5,10; Feng, Chenguang3; Near, Thomas J.6; Wing, Rod A.7; Wang, Wen3; Wang, Kun3; Wang, Jing8,11,13; Xu, Xun9; Yang, Huanming1,9; Liu, Xin1,9,12; Chen, Nansheng8,11,13,14; He, Shunping2 | |
| Corresponding Author | He, Shunping(clad@ihb.ac.cn) |
| 2020-08-01 | |
| Source Publication | GIGASCIENCE
 |
| ISSN | 2047-217X |
| Volume | 9Issue:8Pages:7 |
| Abstract | Background: With more than 30,000 species, fish-including bony, jawless, and cartilaginous fish-are the largest vertebrate group, and include some of the earliest vertebrates. Despite their critical roles in many ecosystems and human society, fish genomics lags behind work on birds and mammals. This severely limits our understanding of evolution and hinders progress on the conservation and sustainable utilization of fish. Results: Here, we announce the Fish10K project, a portion of the Earth BioGenome Project aiming to sequence 10,000 representative fish genomes in a systematic fashion within 10 years, and we officially welcome collaborators to join this effort. As a step towards this goal, we herein describe a feasible workflow for the procurement and storage of biospecimens, as well as sequencing and assembly strategies. Conclusions: To illustrate, we present the genomes of 10 fish species from a cohort of 93 species chosen for technology development. |
| Keyword | Fish10K fish genome sequencing phylogenetics evolution stLFR |
| DOI | 10.1093/gigascience/giaa080 |
| Funding Organization | special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| Funding Project | special funding of Blue granary scientific and technological innovation of China[2018YFD0900301-05] |
| WOS Research Area | Life Sciences & Biomedicine - Other Topics ; Science & Technology - Other Topics |
| WOS Subject | Biology ; Multidisciplinary Sciences |
| WOS ID | WOS:000569172100003 |
| Publisher | OXFORD UNIV PRESS |
| Funding Organization | special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China ; special funding of Blue granary scientific and technological innovation of China |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ihb.ac.cn/handle/342005/38829 |
| Collection | 水生生物多样性与资源保护研究中心_期刊论文 |
| Corresponding Author | He, Shunping |
| Affiliation | 1.BGI Qingdao, 2 Hengyunshan Rd, Qingdao 266426, Peoples R China 2.Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, 7 Donghu South Rd, Wuhan, Hubei, Peoples R China 3.Northwestern Polytech Univ, Ctr Ecol & Environm Sci, 1 Dongxiang Rd, Xian 710129, Shaanxi, Peoples R China 4.Frasergen, Donghu High Tech Dev Zone, Wuhan, Hubei, Peoples R China 5.Nanjing Normal Univ, Coll Life Sci, Integrat Biol Lab, 1 Wenyuan Rd, Nanjing 210023, Peoples R China 6.Yale Univ, Dept Ecol & Evolutionary Biol, New Haven, CT 06511 USA 7.King Abdullah Univ Sci & Technol, Biol & Environm Sci & Engn Div, Thuwal 239556900, Saudi Arabia 8.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, 7 Nanhai Rd, Qingdao 266071, Shandong, Peoples R China 9.BGI Shenzhen, Bldg 11, Shenzhen 518083, Peoples R China 10.Queensland Univ Technol, Comparat & Endocrine Biol Lab, Translat Res Inst, Inst Hlth & Biomed Innovat,Sch Biomed Sci, Brisbane, Qld 4102, Australia 11.Pilot Natl Lab Marine Sci & Technol, Marine Ecol & Environm Sci Lab, 1 Wenhai Rd, Qingdao 266237, Shandong, Peoples R China 12.BGI Shenzhen, State Key Lab Agr Genom, Bldg 11, Shenzhen 518083, Peoples R China 13.Chinese Acad Sci, Ctr Ocean Mega Sci, 7 Nanhai Rd, Qingdao 266400, Peoples R China 14.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada |
| Recommended Citation GB/T 7714 | Fan, Guangyi,Song, Yue,Yang, Liandong,et al. Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)[J]. GIGASCIENCE,2020,9(8):7. |
| APA | Fan, Guangyi.,Song, Yue.,Yang, Liandong.,Huang, Xiaoyun.,Zhang, Suyu.,...&He, Shunping.(2020).Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K).GIGASCIENCE,9(8),7. |
| MLA | Fan, Guangyi,et al."Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)".GIGASCIENCE 9.8(2020):7. |
| Files in This Item: | There are no files associated with this item. | |||||
Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.
Edit Comment