| The intestinal microbiome of an Indo-Pacific humpback dolphin (Sousa chinensis) stranded near the Pearl River Estuary, China | |
| Wan, Xiaoling1; Li, Jia1,2; Cheng, Zhaolong1,3; Ao, Mengxue1; Tian, Renmao4,5; Mclaughlin, Richard William1,6; Zheng, Jinsong1; Wang, Ding1 | |
| Corresponding Author | Zheng, Jinsong(zhengjinsong@ihb.ac.cn) |
| 2020-08-27 | |
| Source Publication | INTEGRATIVE ZOOLOGY
 |
| ISSN | 1749-4877 |
| Pages | 13 |
| Abstract | The mammalian intestinal microbiome is critical for host health and disease resistance. However, the cetacean intestinal microbiota remains relatively unexplored. By using high-throughput 16S rRNA gene sequencing, we analyzed intestinal bacterial samples from an Indo-pacific humpback dolphin (Sousa chinensis) stranded near the Pearl River Estuary in China. The samples included 3 anatomical regions (foregut, midgut, and rectum) and 2 anatomical locations (content and mucus). Our analyses revealed that the dolphin intestinal bacteria contained 139 operational taxonomic units (OTUs), dominated at the phyla level byFirmicutes(47.05% in the content; 94.77% in the mucus), followed byBacteroidetes(23.63% in the content; 1.58% in the mucus) andGammaproteobacteria(14.82% in the content; 2.05% in the mucus). The intestinal bacteria had a small core community (15 OTUs, accounting for 99.74% of the reads), some of which could be potentially pathogenic to both human and dolphins. As an alternative to sampling the dolphin intestinal bacteria, fecal sampling could be used. Additionally, function potentials such as, xenobiotics biodegradation, beta-lactam resistance, and human disease-related pathways, were detected in the dolphin intestinal bacteria. These findings provide the first baseline knowledge of the intestinal microbiome of the Indo-Pacific humpback dolphin, which may offer new insights into cetacean conservation by using microbial surveillance. |
| Keyword | 16S rRNA gene high-throughput sequencing anthropogenic impact cetacean indo-pacific humpback dolphin intestinal microbiota |
| DOI | 10.1111/1749-4877.12477 |
| Funding Organization | Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| Funding Project | Bureau of Science & Technology for Development ; Chinese Academy of Sciences[ZSSD-004] ; National Key Programme of Research and Development of Ministry of Science and Technology of China[2016YFC0503200] |
| WOS Research Area | Zoology |
| WOS Subject | Zoology |
| WOS ID | WOS:000562874100001 |
| WOS Keyword | EDWARDSIELLA-TARDA ; FUTURE-DIRECTIONS ; ESCHERICHIA-COLI ; GUT MICROBIOME ; DIVERSITY ; SEQUENCES ; IMPACTS |
| Publisher | WILEY |
| Funding Organization | Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Bureau of Science & Technology for Development ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; Chinese Academy of Sciences ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China ; National Key Programme of Research and Development of Ministry of Science and Technology of China |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ihb.ac.cn/handle/342005/38739 |
| Collection | 水生生物多样性与资源保护研究中心_期刊论文 |
| Corresponding Author | Zheng, Jinsong |
| Affiliation | 1.Chinese Acad Sci, Key Lab Aquat Biodivers & Conservat, Inst Hydrobiol, Wuhan, Peoples R China 2.Univ Chinese Acad Sci, Beijing, Peoples R China 3.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao, Peoples R China 4.Univ Oklahoma, Sch Civil Engn & Environm Sci, Inst Environm Genom, Dept Microbiol & Plant Biol, Norman, OK 73019 USA 5.IIT, Inst Food Safety & Hlth, Bedford Pk, IL USA 6.Gateway Tech Coll, Gen Studies, Kenosha, WI USA |
| Recommended Citation GB/T 7714 | Wan, Xiaoling,Li, Jia,Cheng, Zhaolong,et al. The intestinal microbiome of an Indo-Pacific humpback dolphin (Sousa chinensis) stranded near the Pearl River Estuary, China[J]. INTEGRATIVE ZOOLOGY,2020:13. |
| APA | Wan, Xiaoling.,Li, Jia.,Cheng, Zhaolong.,Ao, Mengxue.,Tian, Renmao.,...&Wang, Ding.(2020).The intestinal microbiome of an Indo-Pacific humpback dolphin (Sousa chinensis) stranded near the Pearl River Estuary, China.INTEGRATIVE ZOOLOGY,13. |
| MLA | Wan, Xiaoling,et al."The intestinal microbiome of an Indo-Pacific humpback dolphin (Sousa chinensis) stranded near the Pearl River Estuary, China".INTEGRATIVE ZOOLOGY (2020):13. |
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