IHB OpenIR  > 水生生物分子与细胞生物学研究中心  > 期刊论文
Mandarin fish (Sinipercidae) genomes provide insights into innate predatory feeding
He, Shan1,2; Li, Ling1,2,3; Lv, Li-Yuan1,2; Cai, Wen-Jing1,2; Dou, Ya-Qi1,2; Li, Jiao1,2; Tang, Shu-Lin1,2; Chen, Xu1,2; Zhang, Zhen1,2; Xu, Jing1,2; Zhang, Yan-Peng1,2; Yin, Zhan4; Wuertz, Sven3; Tao, Ya-Xiong5; Kuhl, Heiner3; Liang, Xu-Fang1,2
Corresponding AuthorKuhl, Heiner(kuhl@igb-berlin.de) ; Liang, Xu-Fang(xfliang@mail.hzau.edu.cn)
2020-07-09
Source PublicationCOMMUNICATIONS BIOLOGY
Volume3Issue:1Pages:13
AbstractMandarin fishes (Sinipercidae) are piscivores that feed solely on live fry. Unlike higher vertebrates, teleosts exhibit feeding behavior driven mainly by genetic responses, with no modification by learning from parents. Mandarin fishes could serve as excellent model organisms for studying feeding behavior. We report a long-read, chromosomal-scale genome assembly for Siniperca chuatsi and genome assemblies for Siniperca kneri, Siniperca scherzeri and Coreoperca whiteheadi. Positive selection analysis revealed rapid adaptive evolution of genes related to predatory feeding/aggression, growth, pyloric caeca and euryhalinity. Very few gill rakers are observed in mandarin fishes; analogously, we found that zebrafish deficient in edar had a gill raker loss phenotype and a more predatory habit, with reduced intake of zooplankton but increased intake of prey fish. Higher expression of bmp4, which could inhibit edar expression and gill raker development through binding of a Xvent-1 site upstream of edar, may cause predatory feeding in Siniperca. He, Li, and Lv et al. took a genomics approach to study innate feeding behavior in mandarin fish. They identify genes related to predatory feeding that underwent rapid adaptive evolution. They also functionally validate the role of bmp4-edar pathway in inducing predatory feeding in zebrafish.
DOI10.1038/s42003-020-1094-y
Funding OrganizationChina Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China
Indexed BySCI ; SCI
Language英语
Funding ProjectChina Agriculture Research System[CARS-46] ; German Research Foundation[DFG KU3596/1-1] ; National Natural Science Foundation of China[31772822] ; National Natural Science Foundation of China[31272641] ; National Natural Science Foundation of China[31602131]
WOS Research AreaLife Sciences & Biomedicine - Other Topics ; Science & Technology - Other Topics
WOS SubjectBiology ; Multidisciplinary Sciences
WOS IDWOS:000552080500004
WOS KeywordPHYLOGENETIC ANALYSIS ; BODY-SIZE ; EVOLUTION ; BEHAVIOR ; PERCIFORMES ; MORPHOLOGY ; NUMBER ; GENES ; PERCH ; MICE
PublisherNATURE PUBLISHING GROUP
Funding OrganizationChina Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; China Agriculture Research System ; German Research Foundation ; German Research Foundation ; German Research Foundation ; German Research Foundation ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China
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Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/36862
Collection水生生物分子与细胞生物学研究中心_期刊论文
Corresponding AuthorKuhl, Heiner; Liang, Xu-Fang
Affiliation1.Huazhong Agr Univ, Coll Fisheries, Chinese Perch Res Ctr, Wuhan, Peoples R China
2.Minist Agr, Key Lab Freshwater Anim Breeding, Innovat Base Chinese Perch Breeding, Wuhan, Peoples R China
3.Leibniz Inst Freshwater Ecol & Inland Fisheries, Dept Ecophysiol & Aquaculture, Berlin, Germany
4.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Peoples R China
5.Auburn Univ, Coll Vet Med, Dept Anat Physiol & Pharmacol, Auburn, AL 36849 USA
Recommended Citation
GB/T 7714
He, Shan,Li, Ling,Lv, Li-Yuan,et al. Mandarin fish (Sinipercidae) genomes provide insights into innate predatory feeding[J]. COMMUNICATIONS BIOLOGY,2020,3(1):13.
APA He, Shan.,Li, Ling.,Lv, Li-Yuan.,Cai, Wen-Jing.,Dou, Ya-Qi.,...&Liang, Xu-Fang.(2020).Mandarin fish (Sinipercidae) genomes provide insights into innate predatory feeding.COMMUNICATIONS BIOLOGY,3(1),13.
MLA He, Shan,et al."Mandarin fish (Sinipercidae) genomes provide insights into innate predatory feeding".COMMUNICATIONS BIOLOGY 3.1(2020):13.
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