Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes | |
Li, Tongtong1,2; Long, Meng1; Li, Huan2; Gatesoupe, Francois-Joel3; Zhang, Xujie4; Zhang, Qianqian1,5; Feng, Dongyue6; Li, Aihua1,5 | |
2017-03-17 | |
Source Publication | FRONTIERS IN MICROBIOLOGY
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ISSN | 1664-302X |
Volume | 8Issue:1Pages:11 |
Abstract | Gut microbiota play key roles in host nutrition and metabolism. However, little is known about the relationship between host genetics, gut microbiota and metabolic profiles. Here, we used high-throughput sequencing and gas chromatography/mass spectrometry approaches to characterize the microbiota composition and the metabolite profiles in the gut of five cyprinid fish species with three different feeding habits raised under identical husbandry conditions. Our results showed that host species and feeding habits significantly affect not only gut microbiota composition but also metabolite profiles (ANOSIM, p <= 0.05). Mantel test demonstrated that host phylogeny, gut microbiota, and metabolite profiles were significantly related to each other (p <= 0.05). Additionally, the carps with the same feeding habits had more similarity in gut microbiota composition and metabolite profiles. Various metabolites were correlated positively with bacterial taxa involved in food degradation. Our results shed new light on the microbiome and metabolite profiles in the gut content of cyprinid fishes, and highlighted the correlations between host genotype, fish gut microbiome and putative functions, and gut metabolite profiles. |
Keyword | correlation host phylogeny gut microbiota metabolite profiles cyprinid fishes |
DOI | 10.3389/fmicb.2017.00454 |
Funding Organization | FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China |
Indexed By | SCI |
Language | 英语 |
Funding Project | FEBL project[2016FBZ04] ; Jiangsu Marine and Fisheries Bureau project[D2015-11] ; Natural Science Foundation of China[30670112] ; Natural Science Foundation of China[31070112] |
WOS Research Area | Microbiology |
WOS Subject | Microbiology |
WOS ID | WOS:000396609200001 |
WOS Keyword | CHROMATOGRAPHY-MASS SPECTROMETRY ; GASTROINTESTINAL MICROBIOTA ; INTESTINAL MICROBIOTA ; BACTERIAL COMMUNITIES ; EVOLUTION ; METABONOMICS ; DIVERSITY ; CARP ; INTEGRATION ; MICROFLORA |
Publisher | FRONTIERS MEDIA SA |
Funding Organization | FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; FEBL project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Jiangsu Marine and Fisheries Bureau project ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China ; Natural Science Foundation of China |
Citation statistics | |
Document Type | 期刊论文 |
Identifier | http://ir.ihb.ac.cn/handle/342005/32898 |
Collection | 其他_期刊论文 |
Corresponding Author | Feng, Dongyue; Li, Aihua |
Affiliation | 1.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Peoples R China 2.Chinese Acad Sci, Chengdu Inst Biol, Key Lab Environm & Appl Microbiol, & Environm Microbiol Key Lab Sichuan Prov, Chengdu, Peoples R China 3.Univ Pau & Pays Adour, Inst Natl Rech Agronom, Nutr Metabolisme & Aquaculture, Saint Pee Nivelle, France 4.Shanghai Ocean Univ, Coll Fisheries & Life Sci, Shanghai, Peoples R China 5.Huazhong Agr Univ, Freshwater Aquaculture Collaborat Innovat Ctr Hub, Wuhan, Peoples R China 6.Natl Fisheries Tech Extens Ctr, Minist Agr, Beijing, Peoples R China |
Recommended Citation GB/T 7714 | Li, Tongtong,Long, Meng,Li, Huan,et al. Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes[J]. FRONTIERS IN MICROBIOLOGY,2017,8(1):11. |
APA | Li, Tongtong.,Long, Meng.,Li, Huan.,Gatesoupe, Francois-Joel.,Zhang, Xujie.,...&Li, Aihua.(2017).Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes.FRONTIERS IN MICROBIOLOGY,8(1),11. |
MLA | Li, Tongtong,et al."Multi-Omics Analysis Reveals a Correlation between the Host Phylogeny, Gut Microbiota and Metabolite Profiles in Cyprinid Fishes".FRONTIERS IN MICROBIOLOGY 8.1(2017):11. |
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