IHB OpenIR
Population Genetics of Calotropis gigantea, a Medicinal and Fiber Resource Plant, as Inferred from Microsatellite Marker Variation in two Native Countries
Islam, Md. Rabiul1,2,3,4; Li, Zhi-Zhong1,3; Gichira, Andrew W.1,3; Alam, Mohammad Nur1,3; Fu, Peng-Cheng5; Hu, Guang-Wan1,2; Wang, Qing-Feng1,2; Chen, Ling-Yun1,2
2019-08-01
Source PublicationBIOCHEMICAL GENETICS
ISSN0006-2928
Volume57Issue:4Pages:522-539
Abstract

Calotropis gigantea is well known for its aesthetic, medicinal, pharmacological, fodder, fuel, and fiber production potential. Unfortunately, this plant species is still undomesticated, and the genetic information available for crop improvement is limited. For this study, we sampled 21 natural populations of C. gigantea from two key areas of its natural distribution range (Bangladesh and China) and genotyped 379 individuals using nine nuclear microsatellite markers. Population genetic diversity was higher in Bangladesh than that observed in Chinese populations. Overall, a moderate level of genetic diversity was found (N-a = 3.73, H-E= 0.466), with most of the genetic variation detected within populations (65.49%) and substantial genetic differentiation (F-ST = 0.345) between the study regions. We observed a significant correlation between genetic and geographic distances (r = 0.287, P = 0.001). The Bayesian clustering, UPGMA tree, and PCoA analyses yielded three distinct genetic pools, but the number of migrants per generation was high (N-M = 0.52-2.78) among them. Our analyses also revealed that some populations may have experienced recent demographic bottlenecks. Our study provides a baseline for exploitation of the genetic resources of C. gigantea in domestication and breeding programs as well as some insights into the germplasm conservation of this valuable plant.

KeywordCalotropis gigantea Domestication Genetic diversity Gene flow Microsatellites Population bottleneck
DOI10.1007/s10528-019-09904-6
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China
Indexed BySCI
Language英语
Funding ProjectNational Natural Science Foundation of China[31670226] ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China
WOS Research AreaBiochemistry & Molecular Biology ; Genetics & Heredity
WOS SubjectBiochemistry & Molecular Biology ; Genetics & Heredity
WOS IDWOS:000475524200004
WOS KeywordHANCORNIA-SPECIOSA GOMES ; NULL ALLELES ; MAINLAND POPULATIONS ; NATURAL-POPULATIONS ; COMPUTER-PROGRAM ; COMMON MILKWEED ; DIVERSITY ; SOFTWARE ; PROCERA ; FRAGMENTATION
PublisherSPRINGER/PLENUM PUBLISHERS
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China ; CAS-TWAS President's PhD Fellowship Program, University of Chinese Academy of Sciences, China
Citation statistics
Cited Times:1[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/32166
Collection中科院水生所知识产出(2009年前)
Corresponding AuthorWang, Qing-Feng; Chen, Ling-Yun
Affiliation1.Chinese Acad Sci, Wuhan Bot Garden, Key Lab Aquat Bot & Watershed Ecol, Wuhan 430074, Hubei, Peoples R China
2.Chinese Acad Sci, Sino Africa Joint Res Ctr, Wuhan 430074, Hubei, Peoples R China
3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
4.Hajee Mohammad Danesh Sci & Technol Univ, Dept Crop Physiol & Ecol, Dinajpur 5200, Bangladesh
5.Luoyang Normal Univ, Life Sci Coll, Luoyang 471934, Peoples R China
Recommended Citation
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Islam, Md. Rabiul,Li, Zhi-Zhong,Gichira, Andrew W.,et al. Population Genetics of Calotropis gigantea, a Medicinal and Fiber Resource Plant, as Inferred from Microsatellite Marker Variation in two Native Countries[J]. BIOCHEMICAL GENETICS,2019,57(4):522-539.
APA Islam, Md. Rabiul.,Li, Zhi-Zhong.,Gichira, Andrew W..,Alam, Mohammad Nur.,Fu, Peng-Cheng.,...&Chen, Ling-Yun.(2019).Population Genetics of Calotropis gigantea, a Medicinal and Fiber Resource Plant, as Inferred from Microsatellite Marker Variation in two Native Countries.BIOCHEMICAL GENETICS,57(4),522-539.
MLA Islam, Md. Rabiul,et al."Population Genetics of Calotropis gigantea, a Medicinal and Fiber Resource Plant, as Inferred from Microsatellite Marker Variation in two Native Countries".BIOCHEMICAL GENETICS 57.4(2019):522-539.
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