IHB OpenIR  > 水生生物分子与细胞生物学研究中心  > 期刊论文
Microcystin-LR Degradation and Gene Regulation of Microcystin-Degrading Novosphingobium sp. THN1 at Different Carbon Concentrations
Wang, Juanping1,2,3; Wang, Chang1,2; Li, Qi1; Shen, Mengyuan1,2; Bai, Peng1,2; Li, Jionghui1,2; Lin, Yan1; Gan, Nanqin1; Li, Tao1; Zhao, Jindong1,4
2019-08-06
Source PublicationFRONTIERS IN MICROBIOLOGY
ISSN1664-302X
Volume10Issue:1Pages:14
Abstract

The bacterium Novosphingobium sp. THN1 (THN1) is capable of degrading microcystin-LR (MC-LR). To study the ability of THN1 to degrade MC-LR and its possible mechanism(s) of regulation, we analyzed the effect of carbon concentrations on the degradation process. The MC-LR degradation rate peaked early and then declined during MC-LR biodegradation. Decreased levels of carbon in the medium caused the degradation peak to occur earlier. The expression of the functional gene mlrA, encoding a microcystinase, showed a similar trend to the MC-LR degradation rate at various carbon concentrations (r(2) = 0.717, p < 0.05), suggesting that regulation of mlrA expression may play an important role in MC-LR degradation by THN1. The total bacterial biomass decreased when the carbon source was limited and did not correlate with the MC-LR degradation rate. Transcriptomic analysis showed that MC-LR degradation differentially regulated 62.16% (2597/4178) of THN1 genes. A considerable number of differentially expressed genes (DEGs) during MC-LR degradation encoded proteins related to carbon-, nitrogen-, and amino acid-related pathways. At 2 h of MC-LR degradation, most DEGs (29/33) involved in carbon and nitrogen metabolism were downregulated. This indicated that MC-LR may regulate carbon and nitrogen pathways of Novosphingobium sp. THN1. KEGG pathway analysis indicated that the upregulated DEGs during MC-LR degradation were mainly related to amino acid degradation and substrate metabolism pathways. Particularly, we detected increased expression of glutathione metabolism-related genes from transcriptomic data at 2 h of MC-LR degradation compared with the gene expression of 0 h, such as GST family protein, glutathione peroxidase, S-(hydroxymethyl) glutathione dehydrogenase, and glutathione-dependent disulfide-bond oxidoreductase that have been reported to be involved in microcystin degradation.

Keywordmicrocystin-LR biodegradation Novosphingobium sp. THN1 carbon availability gene expression transcriptome
DOI10.3389/fmicb.2019.01750
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; 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National Key R&D Program of China ; National Key R&D Program of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; 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Indexed BySCI
Language英语
Funding ProjectNational Natural Science Foundation of China[91851118] ; Science and Technology Basic Resources Investigation Program of China[2017FY100300] ; Key Research Program of the Chinese Academy of Sciences[KFZD-SW-219] ; State Key Laboratory of Freshwater Ecology and Biotechnology[2019FBZ01] ; National Key R&D Program of China[2018YFA0903100]
WOS Research AreaMicrobiology
WOS SubjectMicrobiology
WOS IDWOS:000478890900001
WOS KeywordMICROBIAL-DEGRADATION ; ANOXIC BIODEGRADATION ; BACTERIAL-DEGRADATION ; EVOLUTIONARY ORIGIN ; NUTRIENT CONDITIONS ; ENZYMATIC PATHWAY ; EXPRESSION ; REMOVAL ; TOXICITY ; GLUCOSE
PublisherFRONTIERS MEDIA SA
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; Science and Technology Basic Resources Investigation Program of China ; 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State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Science and Technology Basic Resources Investigation Program of China ; 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Key Research Program of the Chinese Academy of Sciences ; Key Research Program of the Chinese Academy of Sciences ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; State Key Laboratory of Freshwater Ecology and Biotechnology ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Key R&D Program of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; 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Citation statistics
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/32111
Collection水生生物分子与细胞生物学研究中心_期刊论文
Corresponding AuthorLi, Tao
Affiliation1.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Hubei, Peoples R China
2.Univ Chinese Acad Sci, Beijing, Peoples R China
3.Wuhan Univ, Zhongnan Hosp, Sch Pharmaceut Sci, Key Lab Combinatorial Biosynth & Drug Discovery,M, Wuhan, Hubei, Peoples R China
4.Peking Univ, Coll Life Sci, State Key Lab Prot & Plant Genet Engn, Beijing, Peoples R China
Recommended Citation
GB/T 7714
Wang, Juanping,Wang, Chang,Li, Qi,et al. Microcystin-LR Degradation and Gene Regulation of Microcystin-Degrading Novosphingobium sp. THN1 at Different Carbon Concentrations[J]. FRONTIERS IN MICROBIOLOGY,2019,10(1):14.
APA Wang, Juanping.,Wang, Chang.,Li, Qi.,Shen, Mengyuan.,Bai, Peng.,...&Zhao, Jindong.(2019).Microcystin-LR Degradation and Gene Regulation of Microcystin-Degrading Novosphingobium sp. THN1 at Different Carbon Concentrations.FRONTIERS IN MICROBIOLOGY,10(1),14.
MLA Wang, Juanping,et al."Microcystin-LR Degradation and Gene Regulation of Microcystin-Degrading Novosphingobium sp. THN1 at Different Carbon Concentrations".FRONTIERS IN MICROBIOLOGY 10.1(2019):14.
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