IHB OpenIR  > 水生生物多样性与资源保护研究中心  > 期刊论文
Phylogeographic structure, cryptic speciation and demographic history of the sharpbelly (Hemiculter leucisculus), a freshwater habitat generalist from southern China
Chen, Weitao1,2; Zhong, Zaixuan1,2; Dai, Wei1,2; Fan, Qi1; He, Shunping1
2017-09-12
Source PublicationBMC EVOLUTIONARY BIOLOGY
ISSN1471-2148
Volume17Issue:1Pages:13
Abstract

Background: Species with broad distributions frequently divide into multiple genetic forms and may therefore be viewed as "cryptic species". Here, we used the mitochondrial cytochrome b (Cytb) and 12 nuclear DNA loci to investigate phylogeographic structures of the sharpbelly (Hemiculter leucisculus) in rivers in southern China and explored how the geological and climatic factors have shaped the genetic diversity and evolutionary history of this species. Results: Our mitochondrial phylogenetic analysis identified three major lineages (lineages A, B, and C). Lineages B and C showed a relatively narrower geographic distribution, whereas lineage A was widely distributed in numerous drainages. Divergence dates suggested that H. leucisculus populations diverged between 1.61-2.38 Ma. Bayesian species delimitation analysis using 12 nuclear DNA loci indicated the three lineages probably represented three valid taxa. Isolation-with-migration (IM) analysis found substantial gene flow has occurred among the three lineages. Demographic analyses showed that lineages B and C have experienced rapid demographic expansion at 0.03 Ma and 0.08 Ma, respectively. Conclusions: Hemiculter leucisculus populations in drainages in southern China comprise three mtDNA lineages, and each of which may represent a separate species. Intense uplift of the Qinghai-Tibetan Plateau, evolution of Asian monsoons, changes in paleo-drainages, and poor dispersal ability may have driven the divergence of the three putative species. However, gene flow occurs among the three lineages. Climatic fluctuations have a prominent impact on the populations from the lineages B and C, but exerted little influence on the lineage A.

KeywordPhylogeographic structure Cryptic speciation Hemiculter leucisculus Southern China Multilocus
DOI10.1186/s12862-017-1058-0
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects
Indexed BySCI
Language英语
Funding ProjectNational Natural Science Foundation of China[31130049] ; National Natural Science Foundation of China[U1036603] ; Pilot projects[XDB13020100]
WOS Research AreaEvolutionary Biology ; Genetics & Heredity
WOS SubjectEvolutionary Biology ; Genetics & Heredity
WOS IDWOS:000410978500001
WOS KeywordQINGHAI-TIBETAN PLATEAU ; LAST GLACIAL MAXIMUM ; BAYESIAN SPECIES DELIMITATION ; GENUS SCHIZOTHORAX TELEOSTEI ; ZACCO-PLATYPUS TELEOSTEI ; CYTOCHROME-B SEQUENCES ; MOLECULAR PHYLOGENY ; MITOCHONDRIAL-DNA ; GENETIC-STRUCTURE ; ASIAN MONSOON
PublisherBIOMED CENTRAL LTD
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects ; Pilot projects
Citation statistics
Cited Times:4[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/31578
Collection水生生物多样性与资源保护研究中心_期刊论文
Corresponding AuthorHe, Shunping
Affiliation1.Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
Recommended Citation
GB/T 7714
Chen, Weitao,Zhong, Zaixuan,Dai, Wei,et al. Phylogeographic structure, cryptic speciation and demographic history of the sharpbelly (Hemiculter leucisculus), a freshwater habitat generalist from southern China[J]. BMC EVOLUTIONARY BIOLOGY,2017,17(1):13.
APA Chen, Weitao,Zhong, Zaixuan,Dai, Wei,Fan, Qi,&He, Shunping.(2017).Phylogeographic structure, cryptic speciation and demographic history of the sharpbelly (Hemiculter leucisculus), a freshwater habitat generalist from southern China.BMC EVOLUTIONARY BIOLOGY,17(1),13.
MLA Chen, Weitao,et al."Phylogeographic structure, cryptic speciation and demographic history of the sharpbelly (Hemiculter leucisculus), a freshwater habitat generalist from southern China".BMC EVOLUTIONARY BIOLOGY 17.1(2017):13.
Files in This Item: Download All
File Name/Size DocType Version Access License
s12862-017-1058-0.pd(1591KB)期刊论文出版稿开放获取CC BY-NC-SAView Download
Related Services
Recommend this item
Bookmark
Usage statistics
Export to Endnote
Google Scholar
Similar articles in Google Scholar
[Chen, Weitao]'s Articles
[Zhong, Zaixuan]'s Articles
[Dai, Wei]'s Articles
Baidu academic
Similar articles in Baidu academic
[Chen, Weitao]'s Articles
[Zhong, Zaixuan]'s Articles
[Dai, Wei]'s Articles
Bing Scholar
Similar articles in Bing Scholar
[Chen, Weitao]'s Articles
[Zhong, Zaixuan]'s Articles
[Dai, Wei]'s Articles
Terms of Use
No data!
Social Bookmark/Share
File name: s12862-017-1058-0.pdf
Format: Adobe PDF
All comments (0)
No comment.
 

Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.