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Comparison of intestinal microbes in female and male Chinese concave-eared frogs (Odorrana tormota) and effect of nematode infection on gut bacterial communities
Shu, Yilin1,2; Hong, Pei3,4; Tang, Dong1,2; Qing, Hui3,4; Donde, Oscar Omondi3,5; Wang, Huan1,2; Xiao, Bangding3,4; Wu, Hailong1,2
2019-06-01
Source PublicationMICROBIOLOGYOPEN
ISSN2045-8827
Volume8Issue:6Pages:11
Abstract

The Chinese concave-eared frog (Odorrana tormota) is a rare and threatened species with remarkable sexual dimorphism. Intestinal microbes are understood to play important roles in animal physiology, growth, ecology, and evolution. However, little is known about the intestinal microbes in female and male frogs, as well as the contributing effect by gut infesting nematodes to the co-habiting bacteria and their function in degradation food rich in chitin. Here, this study analyzed the microbiota of the intestinal tract of both female and male, healthy as well as nematode-infested concave-eared frogs using high throughput 16S rRNA sequencing and metagenomic techniques. The results showed that the bacterial composition of the microbiota at the phylum level was dominated by Firmicutes, Verrucomicrobia, Bacteroidetes, and Proteobacteria. The study also revealed that the community composition below the class level could be represent sex differences, particularly with regard to Enterobacteriales, Enterobacteriaceae, Peptostreptococcaceae, and Rikenellaceae, among others. Carbohydrate-active enzyme-encoding genes and modules were identified in related gut bacteria by metagenomic analysis, with Bacteroidia, Clostridia, and gammaproteobacteria predicted to be the main classes of chitin-decomposing bacteria in the frog intestine. In addition, the abundance of some bacteria significantly increased or decreased in nematode-infected hosts compared with healthy individuals, including Verrucomicrobia, Verrucomicrobiae, Negativicutes, Actinobacteria, and Bacilli, among others. This indicates that nematode infection may affect the richness and composition of some gut bacteria.

Keywordintestinal microorganism metagenome nematode infection Odorrana tormota sexual dimorphism
DOI10.1002/mbo3.749
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education
Indexed BySCI
Language英语
Funding ProjectNational Natural Science Foundation of China[31370537] ; Doctoral Fund of the Ministry of Education[20133424110006]
WOS Research AreaMicrobiology
WOS SubjectMicrobiology
WOS IDWOS:000471281900002
WOS KeywordONTOGENIC CHANGE ; MARINE FISHES ; HEALTH ; CHITINASE ; BIOMASS ; PROTEIN ; SIZE ; BAY
PublisherWILEY
Funding OrganizationNational Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education ; Doctoral Fund of the Ministry of Education
Citation statistics
Cited Times:2[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/31277
Collection水环境工程研究中心_期刊论文
Corresponding AuthorXiao, Bangding; Wu, Hailong
Affiliation1.Key Lab Conservat & Utilizat Important Biol Resou, Wuhu, Peoples R China
2.Anhui Normal Univ, Coll Life Sci, Wuhu, Peoples R China
3.Chinese Acad Sci, Key Lab Algal Biol, Inst Hydrobiol, Wuhan, Hubei, Peoples R China
4.Univ Chinese Acad Sci, Beijing, Peoples R China
5.Egerton Univ, Dept Environm Sci, Egerton, Kenya
Recommended Citation
GB/T 7714
Shu, Yilin,Hong, Pei,Tang, Dong,et al. Comparison of intestinal microbes in female and male Chinese concave-eared frogs (Odorrana tormota) and effect of nematode infection on gut bacterial communities[J]. MICROBIOLOGYOPEN,2019,8(6):11.
APA Shu, Yilin.,Hong, Pei.,Tang, Dong.,Qing, Hui.,Donde, Oscar Omondi.,...&Wu, Hailong.(2019).Comparison of intestinal microbes in female and male Chinese concave-eared frogs (Odorrana tormota) and effect of nematode infection on gut bacterial communities.MICROBIOLOGYOPEN,8(6),11.
MLA Shu, Yilin,et al."Comparison of intestinal microbes in female and male Chinese concave-eared frogs (Odorrana tormota) and effect of nematode infection on gut bacterial communities".MICROBIOLOGYOPEN 8.6(2019):11.
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