| Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae) | |
| Zhang, D.1,2,3; Zou, H.1,2; Wu, S. G.1,2; Li, M.1,2; Jakovlic, I.4; Zhang, J.4; Chen, R.4; Wang, G. T.1,2; Li, W. X.1,2 | |
| Corresponding Author | Li, W. X.(liwx@ihb.ac.cn) |
| 2018-07-01 | |
| Source Publication | JOURNAL OF HELMINTHOLOGY
 |
| ISSN | 0022-149X |
| Volume | 92Issue:4Pages:455-466 |
| Abstract | Despite the worldwide distribution and pathogenicity of monogenean parasites belonging to the largest helminth genus, Dactylogyrus, there are no complete Dactylogyrinae (subfamily) mitogenomes published to date. In order to fill this knowledge gap, we have sequenced and characterized the complete mitogenome of Dactylogyrus lamellatus, a common parasite on the gills of grass carp (Ctenopharyngodon idella). The circular mitogenome is 15,187 bp in size, containing the standard 22 tRNA genes, 2 rRNA genes, 12 protein-encoding genes and a long non-coding region (NCR). There are two highly repetitive regions in the NCR. We have used concatenated nucleotide sequences of all 36 genes to perform the phylogenetic analysis using Bayesian inference and maximum likelihood approaches. As expected, the two dactylogyrids, D. lamellatus (Dactylogyrinae) and Tetrancistrum nebulosi (Ancyrocephalinae), were closely related to each other. These two formed a sister group with Capsalidae, and this cluster finally formed a further sister group with Gyrodactylidae. Phylogenetic affinity between Dactylogyrinae and Ancyrocephalinae was further confirmed by the similarity in their gene arrangement. The sequencing of the first Dactylogyrinae, along with a more suitable selection of outgroups, has enabled us to infer a much better phylogenetic resolution than recent mitogenomic studies. However, as many lineages of the class Monogenea remain underrepresented or not represented at all, a much larger number of mitogenome sequences will have to be available in order to infer the evolutionary relationships among the monogeneans fully, and with certainty. |
| DOI | 10.1017/S0022149X17000578 |
| Funding Organization | Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| Funding Project | Earmarked Fund for China Agriculture Research System[CARS-46-08] ; National Natural Science Foundation of China[31172409] ; National Natural Science Foundation of China[31272695] ; Major Scientific and Technological Innovation Project of Hubei Province[2015ABA045] |
| WOS Research Area | Parasitology ; Zoology |
| WOS Subject | Parasitology ; Zoology |
| WOS ID | WOS:000435646100007 |
| WOS Keyword | PLATYHELMINTHES MONOGENEA ; MOLECULAR PHYLOGENY ; PARASITIC FLATWORMS ; DNA-SEQUENCE ; EVOLUTION ; BYCHOWSKY ; GENETICS ; PATHOGEN ; PROGRAM ; GENUS |
| Publisher | CAMBRIDGE UNIV PRESS |
| Funding Organization | Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; Earmarked Fund for China Agriculture Research System ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province ; Major Scientific and Technological Innovation Project of Hubei Province |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ihb.ac.cn/handle/342005/30656 |
| Collection | 鱼类生物学及渔业生物技术研究中心_期刊论文 |
| Corresponding Author | Li, W. X. |
| Affiliation | 1.Chinese Acad Sci, Minist Agr, Key Lab Aquaculture Dis Control, Wuhan 430072, Hubei, Peoples R China 2.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Hubei, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 4.Wuhan Inst Biotechnol, Biotransduct Lab, Wuhan 430075, Hubei, Peoples R China |
| Recommended Citation GB/T 7714 | Zhang, D.,Zou, H.,Wu, S. G.,et al. Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae)[J]. JOURNAL OF HELMINTHOLOGY,2018,92(4):455-466. |
| APA | Zhang, D..,Zou, H..,Wu, S. G..,Li, M..,Jakovlic, I..,...&Li, W. X..(2018).Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae).JOURNAL OF HELMINTHOLOGY,92(4),455-466. |
| MLA | Zhang, D.,et al."Sequencing, characterization and phylogenomics of the complete mitochondrial genome of Dactylogyrus lamellatus (Monogenea: Dactylogyridae)".JOURNAL OF HELMINTHOLOGY 92.4(2018):455-466. |
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