| Microbial communities in different regions of the gastrointestinal tract in East Asian finless porpoises (Neophocaena asiaeorientalis sunameri) | |
| Wan, Xiao-Ling1,2; McLaughlin, Richard William1,3; Zheng, Jin-Song1; Hao, Yu-Jiang1; Fan, Fei1; Tian, Ren-Mao4; Wang, Ding1 | |
| Corresponding Author | Zheng, Jin-Song(zhengjinsong@ihb.ac.cn) |
| 2018-09-20 | |
| Source Publication | SCIENTIFIC REPORTS
 |
| ISSN | 2045-2322 |
| Volume | 8Pages:10 |
| Abstract | Mammalian gastrointestinal (GI) tract microbial communities are critical for host health. However, the microbiota along the GI tract in cetaceans has not been well characterized compared to other animals. In this study, the bacteria and fungi present in the stomach, foregut, hindgut and feces, of East Asian finless porpoises (Neophocaena asiaeorientalis sunameri, EAFPs) were characterized using high-throughput sequencing analysis. The bacterial and fungal diversity and richness in the stomach, hindgut and fecal samples tended to be higher than those in the foregut. Bacterial taxonomic compositions found in the hindgut and feces were different from those seen in the stomach and foregut. A greater proportion of strict anaerobic bacteria including Clostridia, Fusobacteria, and Ruminococcaceae were found in the hindgut and fecal samples. The fungal communities present in stomach samples differed from those detected in other regions to some extent. Zygomycota and Neocallimastigomycota were more predominant in the stomach. Some potential pathogens, such as Helicobacter spp. and Vibrio spp., were commonly present along the GI tract. Our study confirms that the fecal microbiota can represent the whole GI tract to some extent because of their relatively higher microbial diversity and presence of potential pathogens. Our study provides the first comprehensive characterization of the EAFPs GI microbiota, expanding on the current knowledge about the bacterial diversity in the GI tract of cetaceans. In addition, this is the first study characterizing the fungal diversity of any species of porpoise. |
| DOI | 10.1038/s41598-018-32512-0 |
| Funding Organization | Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China |
| Indexed By | SCI ; SCI |
| Language | 英语 |
| Funding Project | Bureau of Science & Technology for Development, Chinese Academy of Sciences[ZSSD-004] ; National Natural Science Foundation of China[31430080] ; Ministry of Agriculture of China |
| WOS Research Area | Science & Technology - Other Topics |
| WOS Subject | Multidisciplinary Sciences |
| WOS ID | WOS:000445079400063 |
| WOS Keyword | DOLPHIN STENELLA-COERULEOALBA ; BACTERIAL DIVERSITY ; FECAL MATERIAL ; PHOCAENOIDES ASIAEORIENTALIS ; GUT MICROBIOME ; HELICOBACTER ; INFECTION ; SEQUENCES ; EVOLUTION ; IMPACTS |
| Publisher | NATURE PUBLISHING GROUP |
| Funding Organization | Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; Bureau of Science & Technology for Development, Chinese Academy of Sciences ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China ; Ministry of Agriculture of China |
| Citation statistics | |
| Document Type | 期刊论文 |
| Identifier | http://ir.ihb.ac.cn/handle/342005/29337 |
| Collection | 水生生物多样性与资源保护研究中心_期刊论文 |
| Corresponding Author | Zheng, Jin-Song |
| Affiliation | 1.Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, Wuhan 430072, Hubei, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100039, Peoples R China 3.Gateway Tech Coll, Gen Studies, Kenosha, WI 53144 USA 4.Univ Oklahoma, Inst Environm Genom, Norman, OK 73019 USA |
| Recommended Citation GB/T 7714 | Wan, Xiao-Ling,McLaughlin, Richard William,Zheng, Jin-Song,et al. Microbial communities in different regions of the gastrointestinal tract in East Asian finless porpoises (Neophocaena asiaeorientalis sunameri)[J]. SCIENTIFIC REPORTS,2018,8:10. |
| APA | Wan, Xiao-Ling.,McLaughlin, Richard William.,Zheng, Jin-Song.,Hao, Yu-Jiang.,Fan, Fei.,...&Wang, Ding.(2018).Microbial communities in different regions of the gastrointestinal tract in East Asian finless porpoises (Neophocaena asiaeorientalis sunameri).SCIENTIFIC REPORTS,8,10. |
| MLA | Wan, Xiao-Ling,et al."Microbial communities in different regions of the gastrointestinal tract in East Asian finless porpoises (Neophocaena asiaeorientalis sunameri)".SCIENTIFIC REPORTS 8(2018):10. |
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