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The mitochondrial genome of Schizothorax esocinus (Cypriniformes: Cyprinidae) from Northern Pakistan
Khan, Muhammad Fiaz1,2; Khattak, Muhammad Nasir Khan1; He, Dekui2; Liang, Yangyang2; Li, Chunhua2; Dawar, Farman Ullah1; Chen, Yifeng2
2016
Source PublicationMITOCHONDRIAL DNA
ISSN1940-1736
Volume27Issue:5Pages:3772-3773
AbstractThe mitochondrial DNA sequence represents a mainstay of phylogenetics. It allows biologists to elucidate the evolutionary relationships among species. It also permits an examination of the relatedness of populations, hence got importance in the field of biology. The current study was designed to know the mitochondrial sequence of Schizothorax esocinus, a delicious fish belonging to family Cyprinidae. In this study, the complete mitochondrial genome of S. esocinus from Northern Pakistan was determined. The mitogenome of S. esocinus was found to be 16 591 bp in length and consisted of 13 protein coding genes, 22 tRNA genes, two rRNA genes, and one control region. All genes were encoded on heavy strain except ND6 and few tRNA genes. The overall base composition was T 25.5%, C 27.0%, A 29.8% and G 17.7%, A + T content 55.3% and G + C content 47.7%. The length of control region (CR) was 938 bp and contained putative termination-associated sequence (TAS) and several conserved sequence blocks (CSB) and control region also contained a microsatellite region (TA). This is the very first study reported from a reservoir of large cold water bodies in Pakistan which have a great potential for conservation of cold water fish species. This mitogenome sequence would be useful to know the phylogenetic status of the fish.
SubtypeArticle
KeywordMitochondrial Genome Pakistan Schizothorax Esocinus Schizothoracinae
DOI10.3109/19401736.2015.1079899
WOS HeadingsScience & Technology ; Life Sciences & Biomedicine
Indexed BySCI
Funding OrganizationNational Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208)
Language英语
WOS Research AreaGenetics & Heredity
WOS SubjectGenetics & Heredity
WOS KeywordRNA GENES
WOS IDWOS:000377956700284
Funding OrganizationNational Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208) ; National Natural Science Foundation of China(41030208)
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Cited Times:2[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/27996
Collection水生生物多样性与资源保护研究中心
Affiliation1.Hazara Univ, Dept Zool, Mansehra, Pakistan
2.Chinese Acad Sci, Inst Hydrobiol, Lab Biol Invas & Adapt Evolut, Wuhan 430072, Hubei, Peoples R China
Recommended Citation
GB/T 7714
Khan, Muhammad Fiaz,Khattak, Muhammad Nasir Khan,He, Dekui,et al. The mitochondrial genome of Schizothorax esocinus (Cypriniformes: Cyprinidae) from Northern Pakistan[J]. MITOCHONDRIAL DNA,2016,27(5):3772-3773.
APA Khan, Muhammad Fiaz.,Khattak, Muhammad Nasir Khan.,He, Dekui.,Liang, Yangyang.,Li, Chunhua.,...&Chen, Yifeng.(2016).The mitochondrial genome of Schizothorax esocinus (Cypriniformes: Cyprinidae) from Northern Pakistan.MITOCHONDRIAL DNA,27(5),3772-3773.
MLA Khan, Muhammad Fiaz,et al."The mitochondrial genome of Schizothorax esocinus (Cypriniformes: Cyprinidae) from Northern Pakistan".MITOCHONDRIAL DNA 27.5(2016):3772-3773.
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