中国科学院水生生物研究所机构知识库
Advanced  
IHB OpenIR  > 鱼类生物学及渔业生物技术研究中心  > 期刊论文
题名: The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation
作者: Wang, Yaping1; Lu, Ying2; Zhang, Yong3, 4; Ning, Zemin5; Li, Yan2; Zhao, Qiang2; Lu, Hengyun2; Huang, Rong1; Xia, Xiaoqin1; Feng, Qi2; Liang, Xufang6, 7; Liu, Kunyan2; Zhang, Lei2; Lu, Tingting2; Huang, Tao2; Fan, Danlin2; Weng, Qijun2; Zhu, Chuanrang2; Lu, Yiqi2; Li, Wenjun2; Wen, Ziruo2; Zhou, Congcong2; Tian, Qilin2; Kang, Xiaojun1, 8; Shi, Mijuan1; Zhang, Wanting1; Jang, Songhun1, 9; Du, Fukuan1; He, Shan6; Liao, Lanjie1; Li, Yongming1; Gui, Bin1; He, Huihui1; Ning, Zhen1; Yang, Cheng1, 8; He, Libo1; Luo, Lifei1; Yang, Rui10; Luo, Qiong10; Liu, Xiaochun3, 4; Li, Shuisheng3, 4; Huang, Wen3, 4; Xiao, Ling3, 4; Lin, Haoran3, 4; Han, Bin2; Zhu, Zuoyan1
通讯作者: Wang, YP (reprint author), Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Peoples R China.
刊名: NATURE GENETICS
发表日期: 2015-06-01
DOI: 10.1038/ng.3280
卷: 47, 期:6, 页:625-631
收录类别: SCI
文章类型: Article
部门归属: [Wang, Yaping ; Huang, Rong ; Xia, Xiaoqin ; Kang, Xiaojun ; Shi, Mijuan ; Zhang, Wanting ; Jang, Songhun ; Du, Fukuan ; Liao, Lanjie ; Li, Yongming ; Gui, Bin ; He, Huihui ; Ning, Zhen ; Yang, Cheng ; He, Libo ; Luo, Lifei ; Zhu, Zuoyan] Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Peoples R China ; [Lu, Ying ; Li, Yan ; Zhao, Qiang ; Lu, Hengyun ; Feng, Qi ; Liu, Kunyan ; Zhang, Lei ; Lu, Tingting ; Huang, Tao ; Fan, Danlin ; Weng, Qijun ; Zhu, Chuanrang ; Lu, Yiqi ; Li, Wenjun ; Wen, Ziruo ; Zhou, Congcong ; Tian, Qilin ; Han, Bin] Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai Inst Plant Physiol & Ecol, Natl Ctr Gene Res, Shanghai, Peoples R China ; [Zhang, Yong ; Liu, Xiaochun ; Li, Shuisheng ; Huang, Wen ; Xiao, Ling ; Lin, Haoran] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China ; [Zhang, Yong ; Liu, Xiaochun ; Li, Shuisheng ; Huang, Wen ; Xiao, Ling ; Lin, Haoran] Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Aquat Econ Anim, Guangzhou 510275, Guangdong, Peoples R China ; [Ning, Zemin] Wellcome Trust Sanger Inst, Hinxton, England ; [Liang, Xufang ; He, Shan] Huazhong Agr Univ, Coll Fisheries, Minist Agr, Key Lab Freshwater Anim Breeding, Wuhan, Peoples R China ; [Liang, Xufang] Huazhong Agr Univ, Coll Fisheries, Freshwater Aquaculture Collaborat Innovat Ctr Hu, Wuhan, Peoples R China ; [Kang, Xiaojun ; Yang, Cheng] China Univ Geosci, Sch Comp Sci, Wuhan 430074, Peoples R China ; [Jang, Songhun] Kim Illinois Sung Univ, Coll Life Sci, Pyongyang, North Korea ; [Yang, Rui ; Luo, Qiong] Yunnan Agr Univ, Coll Plant Protect, Kunming, Peoples R China
WOS标题词: Science & Technology ; Life Sciences & Biomedicine
类目[WOS]: Genetics & Heredity
研究领域[WOS]: Genetics & Heredity
英文摘要: The grass carp is an important farmed fish, accounting for similar to 16% of global freshwater aquaculture, and has a vegetarian diet. Here we report a 0.9-Gb draft genome of a gynogenetic female adult and a 1.07-Gb genome of a wild male adult. Genome annotation identified 27,263 protein-coding gene models in the female genome. A total of 114 scaffolds consisting of 573 Mb are anchored on 24 linkage groups. Divergence between grass carp and zebrafish is estimated to have occurred 49-54 million years ago. We identify a chromosome fusion in grass carp relative to zebrafish and report frequent crossovers between the grass carp X and Y chromosomes. We find that transcriptional activation of the mevalonate pathway and steroid biosynthesis in liver is associated with the grass carp's adaptation from a carnivorous to an herbivorous diet. We believe that the grass carp genome could serve as an initial platform for breeding better-quality fish using a genomic approach.
关键词[WOS]: MOLECULAR CHARACTERIZATION ; EXPRESSION ANALYSIS ; ORGAN SIZE ; GENE ; ZEBRAFISH ; IDENTIFICATION ; FISH ; BIOSYNTHESIS ; DUPLICATION ; DISCOVERY
语种: 英语
WOS记录号: WOS:000355386500013
ISSN号: 1061-4036
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.ihb.ac.cn/handle/342005/23892
Appears in Collections:鱼类生物学及渔业生物技术研究中心_期刊论文

Files in This Item:
File Name/ File Size Content Type Version Access License
The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.pdf(2574KB)----开放获取View 联系获取全文

作者单位: 1.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan, Peoples R China
2.Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai Inst Plant Physiol & Ecol, Natl Ctr Gene Res, Shanghai, Peoples R China
3.Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangzhou 510275, Guangdong, Peoples R China
4.Sun Yat Sen Univ, Sch Life Sci, Guangdong Prov Key Lab Aquat Econ Anim, Guangzhou 510275, Guangdong, Peoples R China
5.Wellcome Trust Sanger Inst, Hinxton, England
6.Huazhong Agr Univ, Coll Fisheries, Minist Agr, Key Lab Freshwater Anim Breeding, Wuhan, Peoples R China
7.Huazhong Agr Univ, Coll Fisheries, Freshwater Aquaculture Collaborat Innovat Ctr Hu, Wuhan, Peoples R China
8.China Univ Geosci, Sch Comp Sci, Wuhan 430074, Peoples R China
9.Kim Illinois Sung Univ, Coll Life Sci, Pyongyang, North Korea
10.Yunnan Agr Univ, Coll Plant Protect, Kunming, Peoples R China
Service
Recommend this item
Sava as my favorate item
Show this item's statistics
Export Endnote File
Google Scholar
Similar articles in Google Scholar
[Wang, Yaping]'s Articles
[Lu, Ying]'s Articles
[Zhang, Yong]'s Articles
CSDL cross search
Similar articles in CSDL Cross Search
[Wang, Yaping]‘s Articles
[Lu, Ying]‘s Articles
[Zhang, Yong]‘s Articles
Related Copyright Policies
Null
Social Bookmarking
Add to CiteULike Add to Connotea Add to Del.icio.us Add to Digg Add to Reddit
文件名: The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.pdf
格式: Adobe PDF
所有评论 (0)
暂无评论
 
评注功能仅针对注册用户开放,请您登录
您对该条目有什么异议,请填写以下表单,管理员会尽快联系您。
内 容:
Email:  *
单位:
验证码:   刷新
您在IR的使用过程中有什么好的想法或者建议可以反馈给我们。
标 题:
 *
内 容:
Email:  *
验证码:   刷新

Items in IR are protected by copyright, with all rights reserved, unless otherwise indicated.

 

 

Valid XHTML 1.0!
Copyright © 2007-2017  中国科学院水生生物研究所 - Feedback
Powered by CSpace