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题名: Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV)
作者: Zhu, Ruo-Lin1; Zhang, Qi-Ya1
通讯作者: Zhang, QY (reprint author), Chinese Acad Sci, Grad Sch, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China.
关键词: HEMORRHAGIC SEPTICEMIA VIRUS ; OLIVE FLOUNDER ; VHSV ; EVOLUTION ; FISH ; GENE
刊名: ARCHIVES OF VIROLOGY
发表日期: 2014-04-01
DOI: 10.1007/s00705-013-1716-5
卷: 159, 期:4, 页:817-820
收录类别: SCI
文章类型: Article
部门归属: [Zhu, Ruo-Lin ; Zhang, Qi-Ya] Chinese Acad Sci, Grad Sch, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China
WOS标题词: Science & Technology ; Life Sciences & Biomedicine
资助者: National Natural Science Foundation of China [31072239, 31270213]; FEBL [2011FBZ12, 2008FBZ16]
类目[WOS]: Virology
研究领域[WOS]: Virology
摘要: Paralichthys olivaceus rhabdovirus (PORV), which is associated with high mortality rates in flounder, was isolated in China in 2005. Here, we provide an annotated sequence record of PORV, the genome of which comprises 11,182 nucleotides and contains six genes in the order 3'-N-P-M-G-NV-L-5'. Phylogenetic analysis based on glycoprotein sequences of PORV and other rhabdoviruses showed that PORV clusters with viral haemorrhagic septicemia virus (VHSV), genus Novirhabdovirus, family Rhabdoviridae. Further phylogenetic analysis of the combined amino acid sequences of six proteins of PORV and VHSV strains showed that PORV clusters with Korean strains and is closely related to Asian strains, all of which were isolated from flounder. In a comparison in which the sequences of the six proteins were combined, PORV shared the highest identity (98.3 %) with VHSV strain KJ2008 from Korea.
英文摘要: Paralichthys olivaceus rhabdovirus (PORV), which is associated with high mortality rates in flounder, was isolated in China in 2005. Here, we provide an annotated sequence record of PORV, the genome of which comprises 11,182 nucleotides and contains six genes in the order 3'-N-P-M-G-NV-L-5'. Phylogenetic analysis based on glycoprotein sequences of PORV and other rhabdoviruses showed that PORV clusters with viral haemorrhagic septicemia virus (VHSV), genus Novirhabdovirus, family Rhabdoviridae. Further phylogenetic analysis of the combined amino acid sequences of six proteins of PORV and VHSV strains showed that PORV clusters with Korean strains and is closely related to Asian strains, all of which were isolated from flounder. In a comparison in which the sequences of the six proteins were combined, PORV shared the highest identity (98.3 %) with VHSV strain KJ2008 from Korea.
关键词[WOS]: HEMORRHAGIC SEPTICEMIA VIRUS ; OLIVE FLOUNDER ; VHSV ; EVOLUTION ; FISH ; GENE
语种: 英语
WOS记录号: WOS:000334055200024
ISSN号: 0304-8608
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.ihb.ac.cn/handle/342005/20043
Appears in Collections:鱼类生物学及渔业生物技术研究中心_期刊论文

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作者单位: 1.Chinese Acad Sci, Grad Sch, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Wuhan 430072, Peoples R China

Recommended Citation:
Zhu, Ruo-Lin; Zhang, Qi-Ya.Determination and analysis of the complete genome sequence of Paralichthys olivaceus rhabdovirus (PORV),ARCHIVES OF VIROLOGY,2014,159(4):817-820
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