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Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes)
Yang, Lei1; Arunachalam, M.2; Sado, Tetsuya3; Levin, Boris A.4,5; Golubtsov, Alexander S.5; Freyhof, Joerg6; Friel, John P.7; Chen, Wei-Jen8; Hirt, M. Vincent9; Manickam, Raja2; Agnew, Mary K.1; Simons, Andrew M.10,11; Saitoh, Kenji12; Miya, Masaki3; Mayden, Richard L.1; He, Shunping13; Mayden, RL (reprint author), St Louis Univ, Dept Biol, 3507 Laclede Ave, St Louis, MO 63103 USA.
2012-11-01
Source PublicationMOLECULAR PHYLOGENETICS AND EVOLUTION
ISSN1055-7903
Volume65Issue:2Pages:362-379
AbstractThe cyprinid tribe Labeonini (sensu Rainboth, 1991) is a large group of freshwater fishes containing around 40 genera and 400 species. They are characterized by an amazing diversity of modifications to their lips and associated structures. In this study, a total of 34 genera and 142 species of putative members of this tribe, which represent most of the generic diversity and more than one third of the species diversity of the group, were sampled and sequenced for four nuclear genes and five mitochondrial genes (totaling 9465 bp). Phylogenetic relationships and subdivision of this tribe were investigated and the placement and status of most genera are discussed. Partitioned maximum likelihood analyses were performed based on the nuclear dataset, mitochondrial dataset, combined dataset, and the dataset for each nuclear gene. Inclusion of the genera Paracrossochilus, Barbichthys, Thynnichthys, and Linichthys in the Labeonini was either confirmed or proposed for the first time. None of the genera Labeo, Garra, Bangana, Cirrhinus, and Crossocheilus are monophyletic. Taxonomic revisions of some genera were made: the generic names Gymnostomus Heckel, 1843, Ageneiogarra Garman, 1912 and Gonorhynchus McClelland, 1839 were revalidated; Akrokolioplax Zhang and Kottelat, 2006 becomes a junior synonym of Gonorhynchus; the species Osteochilus nashii was found to be a member of the barbin genus Osteochilichthys. Five historical hypotheses on the classification of the Labeonini were tested and rejected. We proposed to subdivide the tribe, which is strongly supported as monophyletic, into four subtribes: Labeoina, Garraina, Osteochilina, and Semilabeoina. The taxa included in each subtribe were listed and those taxa that need taxonomic revision were discussed. (C) 2012 Elsevier Inc. All rights reserved.; The cyprinid tribe Labeonini (sensu Rainboth, 1991) is a large group of freshwater fishes containing around 40 genera and 400 species. They are characterized by an amazing diversity of modifications to their lips and associated structures. In this study, a total of 34 genera and 142 species of putative members of this tribe, which represent most of the generic diversity and more than one third of the species diversity of the group, were sampled and sequenced for four nuclear genes and five mitochondrial genes (totaling 9465 bp). Phylogenetic relationships and subdivision of this tribe were investigated and the placement and status of most genera are discussed. Partitioned maximum likelihood analyses were performed based on the nuclear dataset, mitochondrial dataset, combined dataset, and the dataset for each nuclear gene. Inclusion of the genera Paracrossochilus, Barbichthys, Thynnichthys, and Linichthys in the Labeonini was either confirmed or proposed for the first time. None of the genera Labeo, Garra, Bangana, Cirrhinus, and Crossocheilus are monophyletic. Taxonomic revisions of some genera were made: the generic names Gymnostomus Heckel, 1843, Ageneiogarra Garman, 1912 and Gonorhynchus McClelland, 1839 were revalidated; Akrokolioplax Zhang and Kottelat, 2006 becomes a junior synonym of Gonorhynchus; the species Osteochilus nashii was found to be a member of the barbin genus Osteochilichthys. Five historical hypotheses on the classification of the Labeonini were tested and rejected. We proposed to subdivide the tribe, which is strongly supported as monophyletic, into four subtribes: Labeoina, Garraina, Osteochilina, and Semilabeoina. The taxa included in each subtribe were listed and those taxa that need taxonomic revision were discussed. (C) 2012 Elsevier Inc. All rights reserved.
SubtypeArticle
KeywordClassification Cyprinidae Labeoninae Morphology Systematics Taxonomy
Department[Yang, Lei; Agnew, Mary K.; Mayden, Richard L.] St Louis Univ, Dept Biol, St Louis, MO 63103 USA; [Arunachalam, M.; Manickam, Raja] Manonmaniam Sundaranar Univ, Sri Paramakalyani Ctr Environm Sci, Alwarkurichi 627412, Tamil Nadu, India; [Sado, Tetsuya; Miya, Masaki] Nat Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan; [Levin, Boris A.] Russian Acad Sci, Inst Biol Inland Waters, Borok 152742, Russia; [Levin, Boris A.; Golubtsov, Alexander S.] Russian Acad Sci, Severtsov Inst Ecol & Evolut, Moscow 119071, Russia; [Freyhof, Joerg] Leibniz Inst Freshwater Ecol & Inland Fisheries, D-12587 Berlin, Germany; [Friel, John P.] Cornell Univ, Museum Vertebrates, Ithaca, NY 14850 USA; [Chen, Wei-Jen] Natl Taiwan Univ, Inst Oceanog, Taipei 10617, Taiwan; [Hirt, M. Vincent] Univ Minnesota, Grad Program Ecol Evolut & Behav, St Paul, MN 55108 USA; [Simons, Andrew M.] Univ Minnesota, Dept Fisheries Wildlife & Conservat Biol, St Paul, MN 55108 USA; [Simons, Andrew M.] Univ Minnesota, Bell Museum Nat Hist, St Paul, MN 55108 USA; [Saitoh, Kenji] Natl Res Inst Fisheries Sci, Aquat Genom Res Ctr, Kanazawa Ku, Yokohama, Kanagawa 2368648, Japan; [He, Shunping] Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Peoples R China
DOI10.1016/j.ympev.2012.06.007
WOS HeadingsScience & Technology ; Life Sciences & Biomedicine
Funding OrganizationUSA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri
Indexed BySCI
Language英语
WOS Research AreaBiochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
WOS SubjectBiochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
WOS IDWOS:000309636200002
WOS KeywordRIBOSOMAL-RNA GENE ; FISHES TELEOSTEI ; COBITOIDEA TELEOSTEI ; SEQUENCE ALIGNMENT ; GARRA-BARREIMIAE ; CHINA TELEOSTEI ; NUCLEAR ; BOOTSTRAP ; POSITION ; CONFIDENCE
Funding OrganizationUSA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri ; USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri
Citation statistics
Cited Times:40[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/17152
Collection水生生物多样性与资源保护研究中心_期刊论文
Corresponding AuthorMayden, RL (reprint author), St Louis Univ, Dept Biol, 3507 Laclede Ave, St Louis, MO 63103 USA.
Affiliation1.St Louis Univ, Dept Biol, St Louis, MO 63103 USA
2.Manonmaniam Sundaranar Univ, Sri Paramakalyani Ctr Environm Sci, Alwarkurichi 627412, Tamil Nadu, India
3.Nat Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan
4.Russian Acad Sci, Inst Biol Inland Waters, Borok 152742, Russia
5.Russian Acad Sci, Severtsov Inst Ecol & Evolut, Moscow 119071, Russia
6.Leibniz Inst Freshwater Ecol & Inland Fisheries, D-12587 Berlin, Germany
7.Cornell Univ, Museum Vertebrates, Ithaca, NY 14850 USA
8.Natl Taiwan Univ, Inst Oceanog, Taipei 10617, Taiwan
9.Univ Minnesota, Grad Program Ecol Evolut & Behav, St Paul, MN 55108 USA
10.Univ Minnesota, Dept Fisheries Wildlife & Conservat Biol, St Paul, MN 55108 USA
11.Univ Minnesota, Bell Museum Nat Hist, St Paul, MN 55108 USA
12.Natl Res Inst Fisheries Sci, Aquat Genom Res Ctr, Kanazawa Ku, Yokohama, Kanagawa 2368648, Japan
13.Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Peoples R China
Recommended Citation
GB/T 7714
Yang, Lei,Arunachalam, M.,Sado, Tetsuya,et al. Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes)[J]. MOLECULAR PHYLOGENETICS AND EVOLUTION,2012,65(2):362-379.
APA Yang, Lei.,Arunachalam, M..,Sado, Tetsuya.,Levin, Boris A..,Golubtsov, Alexander S..,...&Mayden, RL .(2012).Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes).MOLECULAR PHYLOGENETICS AND EVOLUTION,65(2),362-379.
MLA Yang, Lei,et al."Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes)".MOLECULAR PHYLOGENETICS AND EVOLUTION 65.2(2012):362-379.
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