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题名: Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes)
作者: Yang, Lei1; Arunachalam, M.2; Sado, Tetsuya3; Levin, Boris A.4, 5; Golubtsov, Alexander S.5; Freyhof, Joerg6; Friel, John P.7; Chen, Wei-Jen8; Hirt, M. Vincent9; Manickam, Raja2; Agnew, Mary K.1; Simons, Andrew M.10, 11; Saitoh, Kenji12; Miya, Masaki3; Mayden, Richard L.1; He, Shunping13
通讯作者: Mayden, RL (reprint author), St Louis Univ, Dept Biol, 3507 Laclede Ave, St Louis, MO 63103 USA.
关键词: Classification ; Cyprinidae ; Labeoninae ; Morphology ; Systematics ; Taxonomy
刊名: MOLECULAR PHYLOGENETICS AND EVOLUTION
发表日期: 2012-11-01
DOI: 10.1016/j.ympev.2012.06.007
卷: 65, 期:2, 页:362-379
收录类别: SCI
文章类型: Article
部门归属: [Yang, Lei; Agnew, Mary K.; Mayden, Richard L.] St Louis Univ, Dept Biol, St Louis, MO 63103 USA; [Arunachalam, M.; Manickam, Raja] Manonmaniam Sundaranar Univ, Sri Paramakalyani Ctr Environm Sci, Alwarkurichi 627412, Tamil Nadu, India; [Sado, Tetsuya; Miya, Masaki] Nat Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan; [Levin, Boris A.] Russian Acad Sci, Inst Biol Inland Waters, Borok 152742, Russia; [Levin, Boris A.; Golubtsov, Alexander S.] Russian Acad Sci, Severtsov Inst Ecol & Evolut, Moscow 119071, Russia; [Freyhof, Joerg] Leibniz Inst Freshwater Ecol & Inland Fisheries, D-12587 Berlin, Germany; [Friel, John P.] Cornell Univ, Museum Vertebrates, Ithaca, NY 14850 USA; [Chen, Wei-Jen] Natl Taiwan Univ, Inst Oceanog, Taipei 10617, Taiwan; [Hirt, M. Vincent] Univ Minnesota, Grad Program Ecol Evolut & Behav, St Paul, MN 55108 USA; [Simons, Andrew M.] Univ Minnesota, Dept Fisheries Wildlife & Conservat Biol, St Paul, MN 55108 USA; [Simons, Andrew M.] Univ Minnesota, Bell Museum Nat Hist, St Paul, MN 55108 USA; [Saitoh, Kenji] Natl Res Inst Fisheries Sci, Aquat Genom Res Ctr, Kanazawa Ku, Yokohama, Kanagawa 2368648, Japan; [He, Shunping] Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Peoples R China
WOS标题词: Science & Technology ; Life Sciences & Biomedicine
资助者: USA National Science Foundation; The Cypriniformes Tree of Life initiative (CToL) [EF 0431326, EF 0431132]; Collaborative PBI All Cypriniformes Species - Phase II of An Inventory of the Otophysi (ACSI-II) [DEB1021840]; Japan Society for the Promotion of Science [17207007, 22370035]; Saint Louis University, St. Louis, Missouri
类目[WOS]: Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
研究领域[WOS]: Biochemistry & Molecular Biology ; Evolutionary Biology ; Genetics & Heredity
摘要: The cyprinid tribe Labeonini (sensu Rainboth, 1991) is a large group of freshwater fishes containing around 40 genera and 400 species. They are characterized by an amazing diversity of modifications to their lips and associated structures. In this study, a total of 34 genera and 142 species of putative members of this tribe, which represent most of the generic diversity and more than one third of the species diversity of the group, were sampled and sequenced for four nuclear genes and five mitochondrial genes (totaling 9465 bp). Phylogenetic relationships and subdivision of this tribe were investigated and the placement and status of most genera are discussed. Partitioned maximum likelihood analyses were performed based on the nuclear dataset, mitochondrial dataset, combined dataset, and the dataset for each nuclear gene. Inclusion of the genera Paracrossochilus, Barbichthys, Thynnichthys, and Linichthys in the Labeonini was either confirmed or proposed for the first time. None of the genera Labeo, Garra, Bangana, Cirrhinus, and Crossocheilus are monophyletic. Taxonomic revisions of some genera were made: the generic names Gymnostomus Heckel, 1843, Ageneiogarra Garman, 1912 and Gonorhynchus McClelland, 1839 were revalidated; Akrokolioplax Zhang and Kottelat, 2006 becomes a junior synonym of Gonorhynchus; the species Osteochilus nashii was found to be a member of the barbin genus Osteochilichthys. Five historical hypotheses on the classification of the Labeonini were tested and rejected. We proposed to subdivide the tribe, which is strongly supported as monophyletic, into four subtribes: Labeoina, Garraina, Osteochilina, and Semilabeoina. The taxa included in each subtribe were listed and those taxa that need taxonomic revision were discussed. (C) 2012 Elsevier Inc. All rights reserved.
英文摘要: The cyprinid tribe Labeonini (sensu Rainboth, 1991) is a large group of freshwater fishes containing around 40 genera and 400 species. They are characterized by an amazing diversity of modifications to their lips and associated structures. In this study, a total of 34 genera and 142 species of putative members of this tribe, which represent most of the generic diversity and more than one third of the species diversity of the group, were sampled and sequenced for four nuclear genes and five mitochondrial genes (totaling 9465 bp). Phylogenetic relationships and subdivision of this tribe were investigated and the placement and status of most genera are discussed. Partitioned maximum likelihood analyses were performed based on the nuclear dataset, mitochondrial dataset, combined dataset, and the dataset for each nuclear gene. Inclusion of the genera Paracrossochilus, Barbichthys, Thynnichthys, and Linichthys in the Labeonini was either confirmed or proposed for the first time. None of the genera Labeo, Garra, Bangana, Cirrhinus, and Crossocheilus are monophyletic. Taxonomic revisions of some genera were made: the generic names Gymnostomus Heckel, 1843, Ageneiogarra Garman, 1912 and Gonorhynchus McClelland, 1839 were revalidated; Akrokolioplax Zhang and Kottelat, 2006 becomes a junior synonym of Gonorhynchus; the species Osteochilus nashii was found to be a member of the barbin genus Osteochilichthys. Five historical hypotheses on the classification of the Labeonini were tested and rejected. We proposed to subdivide the tribe, which is strongly supported as monophyletic, into four subtribes: Labeoina, Garraina, Osteochilina, and Semilabeoina. The taxa included in each subtribe were listed and those taxa that need taxonomic revision were discussed. (C) 2012 Elsevier Inc. All rights reserved.
关键词[WOS]: RIBOSOMAL-RNA GENE ; FISHES TELEOSTEI ; COBITOIDEA TELEOSTEI ; SEQUENCE ALIGNMENT ; GARRA-BARREIMIAE ; CHINA TELEOSTEI ; NUCLEAR ; BOOTSTRAP ; POSITION ; CONFIDENCE
语种: 英语
WOS记录号: WOS:000309636200002
ISSN号: 1055-7903
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.ihb.ac.cn/handle/342005/17152
Appears in Collections:水生生物多样性与资源保护研究中心_期刊论文

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作者单位: 1.St Louis Univ, Dept Biol, St Louis, MO 63103 USA
2.Manonmaniam Sundaranar Univ, Sri Paramakalyani Ctr Environm Sci, Alwarkurichi 627412, Tamil Nadu, India
3.Nat Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan
4.Russian Acad Sci, Inst Biol Inland Waters, Borok 152742, Russia
5.Russian Acad Sci, Severtsov Inst Ecol & Evolut, Moscow 119071, Russia
6.Leibniz Inst Freshwater Ecol & Inland Fisheries, D-12587 Berlin, Germany
7.Cornell Univ, Museum Vertebrates, Ithaca, NY 14850 USA
8.Natl Taiwan Univ, Inst Oceanog, Taipei 10617, Taiwan
9.Univ Minnesota, Grad Program Ecol Evolut & Behav, St Paul, MN 55108 USA
10.Univ Minnesota, Dept Fisheries Wildlife & Conservat Biol, St Paul, MN 55108 USA
11.Univ Minnesota, Bell Museum Nat Hist, St Paul, MN 55108 USA
12.Natl Res Inst Fisheries Sci, Aquat Genom Res Ctr, Kanazawa Ku, Yokohama, Kanagawa 2368648, Japan
13.Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Peoples R China

Recommended Citation:
Yang, Lei; Arunachalam, M.; Sado, Tetsuya; Levin, Boris A.; Golubtsov, Alexander S.; Freyhof, Joerg; Friel, John P.; Chen, Wei-Jen; Hirt, M. Vincent; Manickam, Raja; Agnew, Mary K.; Simons, Andrew M.; Saitoh, Kenji; Miya, Masaki; Mayden, Richard L.; He, Shunping.Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei: Cypriniformes),MOLECULAR PHYLOGENETICS AND EVOLUTION,2012,65(2):362-379
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文件名: Molecular phylogeny of the cyprinid tribe Labeonini (Teleostei Cypriniformes).pdf
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