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Phylogenetic analysis of two cyanobacterial genera Cylindrospermopsis and Raphidiopsis based on multi-gene sequences
Wu, Zhongxing; Shi, Junqiong; Xiao, Peng; Liu, Yang; Li, Renhui; Liu, Y; Li, RH (reprint author), Chinese Acad Sci, Key Lab Freshwater Ecol & Biotechnol, Inst Hydrobiol, Wuhan 430072, Hubei, Peoples R China; reli@ihb.ac.cn
2011
Source PublicationHARMFUL ALGAE
ISSN1568-9883
Volume10Issue:5Pages:419-425
AbstractA multi-gene analysis was performed to investigate the phylogenetic relationship between the cyanobacterial genera Cylindrospermopsis and Raphidiopsis. The phylogeny based on the concatenated sequences of seven gene loci including psbA, 165 rDNA, rbcL, rbcS, rpoC1, cpcB, and ITS1 between 16S and 235 rDNA, indicated that 12 strains of C raciborskii, 6 strains of R. mediterranea, and 3 strains of R. curvata were clustered into two distinct groups, named as Clade A and Clade B, respectively. Clade A was composed of only strains of C raciborskii; however, in Clade B, 3 sub-groups were found: 2 well supported sub-groups as termed B1 for R. mediterranea and B2 for R. curvata and R. brookii, and B3 for the remaining strains of C. raciborskii, thus suggesting that Cylindrospermopsis and Raphidiopsis might be congeneric. Additionally, these results also suggested that the traditionally defined C. raciborskii is paraphyletic, and Glade A and Cade B deserved some taxonomic reconsideration, either as separate genera or as separate species within the same genus. (C) 2010 Elsevier B.V. All rights reserved.
KeywordCyanobacteria Cylindrospermopsis Multi-gene Analysis Phylogeny Raphidiopsis
Department[Wu, ZX; Xiao, P; Liu, Y; Li, RH] Chinese Acad Sci, Key Lab Freshwater Ecol & Biotechnol, Inst Hydrobiol, Wuhan 430072, Hubei, Peoples R China; [Shi, JQ] Henan Normal Univ, Coll Life Sci, Xinxiang 453007, Henan, Peoples R China; [Xiao, P; Liu, Y] Chinese Acad Sci, Grad Univ, Beijing 100049, Peoples R China
Subject AreaMarine & Freshwater Biology
Funding OrganizationNational Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501]
Indexed BySCI
Language英语
WOS IDWOS:000292233300001
Funding OrganizationNational Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501] ; National Natural Science Foundation of China[30800123, 30770165]; State Key Basic Research and Development Plan of China[2008CB418002]; Chinese Academy of Sciences[KZCX1-YW-14-1, 082303-1-501]
Citation statistics
Cited Times:23[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/342005/16383
Collection藻类生物学及应用研究中心_期刊论文
Corresponding AuthorLiu, Y; Li, RH (reprint author), Chinese Acad Sci, Key Lab Freshwater Ecol & Biotechnol, Inst Hydrobiol, Wuhan 430072, Hubei, Peoples R China; reli@ihb.ac.cn
Recommended Citation
GB/T 7714
Wu, Zhongxing,Shi, Junqiong,Xiao, Peng,et al. Phylogenetic analysis of two cyanobacterial genera Cylindrospermopsis and Raphidiopsis based on multi-gene sequences[J]. HARMFUL ALGAE,2011,10(5):419-425.
APA Wu, Zhongxing.,Shi, Junqiong.,Xiao, Peng.,Liu, Yang.,Li, Renhui.,...&reli@ihb.ac.cn.(2011).Phylogenetic analysis of two cyanobacterial genera Cylindrospermopsis and Raphidiopsis based on multi-gene sequences.HARMFUL ALGAE,10(5),419-425.
MLA Wu, Zhongxing,et al."Phylogenetic analysis of two cyanobacterial genera Cylindrospermopsis and Raphidiopsis based on multi-gene sequences".HARMFUL ALGAE 10.5(2011):419-425.
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