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学科主题: Biochemistry & Molecular Biology; Ecology; Evolutionary Biology
题名: A phylogeographic, demographic and historical analysis of the short-tailed pit viper (Gloydius brevicaudus): evidence for early divergence and late expansion during the Pleistocene
作者: Ding, Li2, 3; Gan, Xiao-Ni1; He, Shun-Ping1; Zhao, Er-Mi2
通讯作者: He, SP, Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Hubei, Peoples R China ; clad@ihb.ac.cn ; zhaoermi@cib.ac.cn
关键词: biogeography ; Eastern China ; Gloydius brevicaudus ; phylogeography ; Pleistocene refugia
刊名: MOLECULAR ECOLOGY
发表日期: 2011-05-01
DOI: 10.1111/j.1365-294X.2011.05060.x
卷: 20, 期:9, 页:1905-1922
收录类别: SCI
文章类型: Article
部门归属: [Gan, Xiao-Ni; He, Shun-Ping] Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Hubei, Peoples R China; [Ding, Li; Zhao, Er-Mi] Chinese Acad Sci, Chengdu Inst Biol, Chengdu 610041, Sichuan, Peoples R China; [Ding, Li] Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China
WOS标题词: Science & Technology ; Life Sciences & Biomedicine
类目[WOS]: Biochemistry & Molecular Biology ; Ecology ; Evolutionary Biology
研究领域[WOS]: Biochemistry & Molecular Biology ; Environmental Sciences & Ecology ; Evolutionary Biology
摘要: The impact of quaternary glaciation in eastern China on local fanua and flora has been a topic of considerable interest. We used mitochondrial DNA (mtDNA) sequence data and coalescent simulations to test two general biogeographic hypothesis related to the effects of Pleistocene climatic fluctuations for a widespread ophidian species (Gloydius brevicaudus) in eastern China and Korean Peninsula. The phylogenetic analysis revealed three major lineages, the southeast Coastal, Yangtze and North Lineages. The latter two are closely related and jointly form a continental lineage. Divergence dating and coalescent simulations indicate a Late Pliocene to Early Pleistocene divergence between lineages from the southeast coast and continental interior, followed by a mid-to-late Pleistocene divergence between lineages from the north and the middle-lower Yangtze Valley across East China, suggesting that all these lineages predated the last glacial maximum. An overlapping range between the two lineages within the continental lineage and a secondary contact associated with ecological transition zones on the margins of the North China Plain were also observed. These results show that vicariance patterns dominated the history of G. brevicaudus. Though the climatic events of the Pleistocene have had a marked effect on the historical distribution and intra-specific divergence of reptiles in China, coalescent and non-coalescent demographic analyses indicate that all lineages of G. brevicaudus seem not to have been adversely affected by glacial cycles during the Late Pleistocene, presumably because of an increase in the amount of climatically mild habitat in East Asia due to a decline in elevation and the development of monsoons since the Mid-End Pleistocene.
英文摘要: The impact of quaternary glaciation in eastern China on local fanua and flora has been a topic of considerable interest. We used mitochondrial DNA (mtDNA) sequence data and coalescent simulations to test two general biogeographic hypothesis related to the effects of Pleistocene climatic fluctuations for a widespread ophidian species (Gloydius brevicaudus) in eastern China and Korean Peninsula. The phylogenetic analysis revealed three major lineages, the southeast Coastal, Yangtze and North Lineages. The latter two are closely related and jointly form a continental lineage. Divergence dating and coalescent simulations indicate a Late Pliocene to Early Pleistocene divergence between lineages from the southeast coast and continental interior, followed by a mid-to-late Pleistocene divergence between lineages from the north and the middle-lower Yangtze Valley across East China, suggesting that all these lineages predated the last glacial maximum. An overlapping range between the two lineages within the continental lineage and a secondary contact associated with ecological transition zones on the margins of the North China Plain were also observed. These results show that vicariance patterns dominated the history of G. brevicaudus. Though the climatic events of the Pleistocene have had a marked effect on the historical distribution and intra-specific divergence of reptiles in China, coalescent and non-coalescent demographic analyses indicate that all lineages of G. brevicaudus seem not to have been adversely affected by glacial cycles during the Late Pleistocene, presumably because of an increase in the amount of climatically mild habitat in East Asia due to a decline in elevation and the development of monsoons since the Mid-End Pleistocene.
关键词[WOS]: POSTGLACIAL POPULATION EXPANSION ; MITOCHONDRIAL-DNA SEQUENCES ; NORTH-AMERICAN SONGBIRD ; PANDA AILURUS-FULGENS ; ICE AGES ; PHYLOGENETIC-RELATIONSHIPS ; AVIAN PHYLOGEOGRAPHY ; PAIRWISE COMPARISONS ; BAYESIAN-INFERENCE ; STATISTICAL TESTS
语种: 英语
WOS记录号: WOS:000289522400012
ISSN号: 0962-1083
Citation statistics:
内容类型: 期刊论文
URI标识: http://ir.ihb.ac.cn/handle/342005/15566
Appears in Collections:水生生物多样性与资源保护研究中心_期刊论文

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作者单位: 1.Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Hubei, Peoples R China
2.Chinese Acad Sci, Chengdu Inst Biol, Chengdu 610041, Sichuan, Peoples R China
3.Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China

Recommended Citation:
Ding, Li; Gan, Xiao-Ni; He, Shun-Ping; Zhao, Er-Mi.A phylogeographic, demographic and historical analysis of the short-tailed pit viper (Gloydius brevicaudus): evidence for early divergence and late expansion during the Pleistocene,MOLECULAR ECOLOGY,2011,20(9):1905-1922
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文件名: A phylogeographic, demographic and historical analysis of the short-tailed pit viper (Gloydius brevicaudus) evidence for early divergence and late expansion during the Pleistocene.pdf
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