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Molecular phylogenetic relationships of Eastern Asian Cyprinidae (Pisces : Cypriniformes) inferred from cytochrome b sequences
He, SP; Liu, HZ; Chen, YY; Kuwahara, M; Nakajima, T; Zhong, Y; He, SP, Chinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China
2004-04-01
Source PublicationSCIENCE IN CHINA SERIES C-LIFE SCIENCES
ISSN1006-9305
Volume47Issue:2Pages:130-138
AbstractComplete mitochondrial cytochrome b sequences of 54 species, including 18 newly sequenced, were analyzed to infer the phylogenetic relationships within the family Cyprinidae in East Asia. Phylogenetic trees were generated using various tree-building methods, including Neighbor-joining (NJ), Maximum Parsimony (MP) and Maximum Likelihood (ML) methods, with Myxocyprinus asiaticus (family Catostomidae) as the designated outgroup. The results from NJ and ML methods were mostly similar, supporting some existing subfamilies within Cyprinidae as monophyletic, such as Cultrinae, Xenocyprinae and Gobioninae (including Gobiobotinae). However, genera within the subfamily "Danioninae" did not form a monophyletic group. The subfamily Leuciscinae was divided into two unrelated groups: the "Leuciscinae" in East Asia forming as a monophyletic group together with Cultrinae and Xenocyprinae, while the Leuciscinae in Europe, Siberia, and North America as another monophyletic group. The monophyly of subfamily Cyprininae sensu Howes was supported by NJ and ML trees and is basal in the tree. The position of Acheilognathinae, a widely accepted monophyletic group represented by Rhodeus sericeus, was not resolved.; Complete mitochondrial cytochrome b sequences of 54 species, including 18 newly sequenced, were analyzed to infer the phylogenetic relationships within the family Cyprinidae in East Asia. Phylogenetic trees were generated using various tree-building methods, including Neighbor-joining (NJ), Maximum Parsimony (MP) and Maximum Likelihood (ML) methods, with Myxocyprinus asiaticus (family Catostomidae) as the designated outgroup. The results from NJ and ML methods were mostly similar, supporting some existing subfamilies within Cyprinidae as monophyletic, such as Cultrinae, Xenocyprinae and Gobioninae (including Gobiobotinae). However, genera within the subfamily "Danioninae" did not form a monophyletic group. The subfamily Leuciscinae was divided into two unrelated groups: the "Leuciscinae" in East Asia forming as a monophyletic group together with Cultrinae and Xenocyprinae, while the Leuciscinae in Europe, Siberia, and North America as another monophyletic group. The monophyly of subfamily Cyprininae sensu Howes was supported by NJ and ML trees and is basal in the tree. The position of Acheilognathinae, a widely accepted monophyletic group represented by Rhodeus sericeus, was not resolved.
SubtypeArticle
KeywordCyprinidae Cytochrome b Molecular Phylogeny Pisces
DepartmentChinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China; Lake Biwa Museum, Shiga 525, Japan; Fudan Univ, Minist Educ, Key Lab Biodivers Sci & Ecol Engn, Sch Life Sci, Shanghai 200433, Peoples R China
Subject AreaBiology
DOI10.1360/03yc0034
WOS HeadingsScience & Technology ; Life Sciences & Biomedicine
Indexed BySCI
Language英语
WOS Research AreaLife Sciences & Biomedicine - Other Topics
WOS SubjectBiology
WOS IDWOS:000220726800005
WOS KeywordEUROPEAN CYPRINIDS ; NUCLEOTIDE-SEQUENCES ; EVOLUTIONARY ; ACTINOPTERYGII ; SYSTEMATICS ; DISTANCE ; FISHES ; GENE ; DNA
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Document Type期刊论文
Identifierhttp://ir.ihb.ac.cn/handle/152342/9516
Collection期刊论文
Corresponding AuthorHe, SP, Chinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China
Affiliation1.Chinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China
2.Lake Biwa Museum, Shiga 525, Japan
3.Fudan Univ, Minist Educ, Key Lab Biodivers Sci & Ecol Engn, Sch Life Sci, Shanghai 200433, Peoples R China
Recommended Citation
GB/T 7714
He, SP,Liu, HZ,Chen, YY,et al. Molecular phylogenetic relationships of Eastern Asian Cyprinidae (Pisces : Cypriniformes) inferred from cytochrome b sequences[J]. SCIENCE IN CHINA SERIES C-LIFE SCIENCES,2004,47(2):130-138.
APA He, SP.,Liu, HZ.,Chen, YY.,Kuwahara, M.,Nakajima, T.,...&He, SP, Chinese Acad Sci, Inst Hydrobiol, Wuhan 430072, Peoples R China.(2004).Molecular phylogenetic relationships of Eastern Asian Cyprinidae (Pisces : Cypriniformes) inferred from cytochrome b sequences.SCIENCE IN CHINA SERIES C-LIFE SCIENCES,47(2),130-138.
MLA He, SP,et al."Molecular phylogenetic relationships of Eastern Asian Cyprinidae (Pisces : Cypriniformes) inferred from cytochrome b sequences".SCIENCE IN CHINA SERIES C-LIFE SCIENCES 47.2(2004):130-138.
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